Pairwise Alignments

Query, 947 a.a., Signal transduction histidine kinase from Kangiella aquimarina DSM 16071

Subject, 1430 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  313 bits (802), Expect = 5e-89
 Identities = 220/658 (33%), Positives = 333/658 (50%), Gaps = 40/658 (6%)

Query: 278  ETLEVNNLELDIARRQALEASRVKTEFLANMSHEIRTPMNGVIGFTELLLKTELNNKQKD 337
            E +     EL  A+  A  A+R K+ FLANMSHEIRTPMN +IG T L+ +     +Q+ 
Sbjct: 665  ELVAARTAELAAAKEAAEAANRSKSSFLANMSHEIRTPMNAIIGLTHLIRRDIATERQRQ 724

Query: 338  FLFDIKRSATSLLSIIDDILDYSKIEAGKMSFERYPFDLRECVDDIFRMLGPNANKKGIE 397
             L  +  +A  LL II+DILD+SKIEAGKMS E   F++   + ++  ++   A  KG+E
Sbjct: 725  QLDKVSNAAHHLLGIINDILDFSKIEAGKMSLEPTDFEVDRVIHNVCTLVAEKAEAKGLE 784

Query: 398  LVSLIYSDVPKALLGDPIRIKQIITNLVNNAIKFTKSGSVELYAEVESENKKGLKLKIQV 457
            +V  I + +P AL GD +R+ Q++ N V NA+KFT+ GSV +   V  +    L ++++V
Sbjct: 785  VVVDI-ARLPPALHGDGLRLGQVLLNFVGNAVKFTERGSVVVRGYVARQEADSLWVRLEV 843

Query: 458  KDSGIGLTQEQQRNLFKAFSQADSSTKREFGGTGLGLVISKSLVEKMGGNIGVNSNQGEG 517
             D+GIGL++EQQ+ LF+AF+QAD ST R++GGTGLGL IS+ L E MGG +GV+S  G+G
Sbjct: 844  ADTGIGLSREQQQCLFQAFTQADVSTTRQYGGTGLGLAISRRLAEMMGGRVGVDSESGKG 903

Query: 518  STFWFTLQCERTDALPEDGLTGEFLANKSVLVFDPHPSTRLSITQILEEWGMLVRSFEKI 577
            STFW         A     L      N   L  D     R S+   L   G  V +    
Sbjct: 904  STFWIEAPFGSVAAHDHLELPPCLPRNLRALAVDDSEDARESLAHTLAALGTRVDTAASG 963

Query: 578  DDLMTEIDLYSQSGKSIELIIIG-----------GQRFRRRQQQLEYICNKAQTQLYCPI 626
            +  +  +    + G   +L+++            G+  R     ++            P 
Sbjct: 964  EAALDAVLAADRLGDPYQLVLLDWLMPPPDGLETGRCIRTLPLNVQPQQLLVSAAKDIPA 1023

Query: 627  ITFTTAGNADFLEHLHSIGVNRAMTKPVTHRALYNSLIELL-KTPSIHSGKEPAEAPVGD 685
               + AG A F+             KPVT  ++  +L      TP +   + P +     
Sbjct: 1024 TALSEAGFAAFI------------AKPVTPASVLVALEGAFGDTPPL--SRSPGDEMERS 1069

Query: 686  ASLLKDIYVLAVDDNPANLRLVTTLLQDLNIKVDAAESGMQAVSLSKNKVYDAILMDIQM 745
             +  ++  +L  +DNP N  +   LL+ + + VD AE+G +A+ L++ K Y  ILMDIQM
Sbjct: 1070 LARYRNQRILLAEDNPLNQEVALELLRHVGLAVDLAENGKEALELARGKAYALILMDIQM 1129

Query: 746  PEMDGLEATRTIRANRTNLNTPIIALTAHAMASEREQLLEAGMDDYMTKPVSEQALVNLL 805
            P MDGLEA+R IRA      TPI+A+TA+A + +R+  + AGM+D++ KPV    L   L
Sbjct: 1130 PVMDGLEASRQIRALPGYAGTPILAMTANAFSEDRDLCIAAGMNDHVAKPVDPDQLYGTL 1189

Query: 806  LKW-TQAASDI---NPTPTVQQEIEDENR-NQSLDWSLSLKLA-------NNNEQLAIDM 853
            L+W  +   D+    P P  +      +    +L+    L+LA        N  +LA  +
Sbjct: 1190 LRWLPEPGRDVVVRPPLPAAEAPAATADALAAALEAVPGLELAQALRVVRGNRTRLAQFL 1249

Query: 854  LKMLVDSNFDTGRNIHAAYQSQDFDQLLQHVHKLHGASCYVGTPKLKHLSNVYETLLK 911
             K  VD   D GR I A     +  +  + VH L G +  +G   ++  +   E  L+
Sbjct: 1250 RKFSVDHGGD-GRRIEACLGFGETAEAARVVHTLKGLAGSLGLAAIQAHTLALEEALR 1306