Pairwise Alignments

Query, 947 a.a., Signal transduction histidine kinase from Kangiella aquimarina DSM 16071

Subject, 935 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella oneidensis MR-1

 Score =  581 bits (1498), Expect = e-170
 Identities = 365/950 (38%), Positives = 532/950 (56%), Gaps = 35/950 (3%)

Query: 1   MKDWGISKRIMTLALTPTILVALLLGTLFISNHINDSKYSLTARGKTIATHLALASEYGL 60
           M  + +   ++ LAL PTILV +LLG+ F  N   + + +L  +G  I   LA+ASE GL
Sbjct: 7   MTKYSLRSWVLVLALAPTILVGILLGSYFTINRFYELEDTLIEQGSNIIEPLAIASEVGL 66

Query: 61  ITLDEKNLAEMAQAARDNDKDLM-AVAIFDQNNRVLASVGSAETLSVMSIDNPYSLARSG 119
           +  D +    +  AA+ N   L+ ++AIFD +N++  +    +   +M      +     
Sbjct: 67  VGNDREATKRLLAAAQLNKSTLVKSIAIFDIHNQLFVTSHYHKDFEIMRYKEALT----- 121

Query: 120 SSNNLMRFARTAESEQGKLFYAPIISKFPETYESWQNYS--QANAQLLGYVAVMMTDEFS 177
              NL +           +   PI +    T     N      N +LLGY++V++  E +
Sbjct: 122 ---NLQK-TEIEHVGDSLILRTPIFATATPTGSEPANVDIQTDNGELLGYISVIINKERA 177

Query: 178 AISRYNTILTTLFITLIGLLIGGFLARRMSMSVTTPIEKMVEGINRIKDGRLDTRIESEA 237
            + ++   +    I LIG+ +      R+  +VT PI +MV  + +I++G+LD R++   
Sbjct: 178 LLEQHRAAVAAFIIVLIGVQLNLLFTFRLVKNVTQPITEMVRVVAKIREGKLDARLQGNL 237

Query: 238 NAELLTLQEGINLMAENMEHNQDEMQLAVDQATEDLRETLETLEVNNLELDIARRQALEA 297
             EL  L+ GIN MA ++    DEMQ  +DQAT DLRETLE +E+ N+ELD+A+++ALEA
Sbjct: 238 IGELDLLKRGINAMAGSLSEYHDEMQQNIDQATSDLRETLEQIEIQNVELDLAKKRALEA 297

Query: 298 SRVKTEFLANMSHEIRTPMNGVIGFTELLLKTELNNKQKDFLFDIKRSATSLLSIIDDIL 357
           SR+K+EFLANMSHE+RTP+NGVIGF   L+KT L++ Q D++  I+RSAT+LL+II+DIL
Sbjct: 298 SRIKSEFLANMSHELRTPLNGVIGFARQLVKTPLHSSQVDYINTIERSATNLLAIINDIL 357

Query: 358 DYSKIEAGKMSFERYPFDLRECVDDIFRMLGPNANKKGIELVSLIYSDVPKALLGDPIRI 417
           D+SK+EAGKM  E  PF LRE + +   ++  +A  KG+ELV  I  +VP  + GD +R+
Sbjct: 358 DFSKLEAGKMVLESMPFGLRETLGETITLISGSAQAKGLELVVDIAPNVPDNVNGDSMRV 417

Query: 418 KQIITNLVNNAIKFTKSGSVELYAEVESENKKGLKLKIQVKDSGIGLTQEQQRNLFKAFS 477
            QII NLV NAIKFT SGSV +  E++++  + + L+  V D+GIG+ + QQ  LF+AF 
Sbjct: 418 CQIINNLVGNAIKFTDSGSVLVKLELQAQTDEQVVLRCDVIDTGIGIDESQQDFLFQAFG 477

Query: 478 QADSSTKREFGGTGLGLVISKSLVEKMGGNIGVNSNQGEGSTFWFTLQCERTDALPEDGL 537
           QADSS  R FGGTGLGLVI+K LV +MGG IG  S+  +GS FWFTL          D L
Sbjct: 478 QADSSISRRFGGTGLGLVITKRLVNQMGGQIGFTSSVDKGSNFWFTLPLGLGQFQIGDSL 537

Query: 538 TGEFLANKSVLVFDPHPSTRLSITQILEEWGMLVRSFEKIDDLMTEIDLYSQSGKSIELI 597
             E L NK+VL ++P   T   I++ L++W   V   + I  L T +   S +    + +
Sbjct: 538 PLEKLQNKTVLFYEPRVLTHSVISRQLKQWDTKVTHHQHIPSLQTTL---STTEHQFDYV 594

Query: 598 IIGGQRFRRRQQQLEYICNKAQTQLYCPIITFTTAGNADFLEHLHSIGVNRAMTKPVTHR 657
           ++    F      +  +  +A+ +  C I+ F      D L        +  ++ PV+  
Sbjct: 595 LLSCHGFNNPNHLVSTLI-QAKAKTDCLIVLF-DCQEQDMLSQFIRPNADVVLSLPVSEH 652

Query: 658 ALYNSLIELLKTPSIHSGKEPAEAPVGDASLLKDIYVLAVDDNPANLRLVTTLLQDLNIK 717
            L  +   +L  P  +    P    V  A   + + VLAVDDN ANL+L+ TLL +L   
Sbjct: 653 QLARN---MLYPPMEYDLLPPVSIAVPAAR--QSLTVLAVDDNFANLKLIDTLLNELVTT 707

Query: 718 VDAAESGMQAVSLSKNKVYDAILMDIQMPEMDGLEATRTIRANRTNLNTPIIALTAHAMA 777
           V A  SG +AV  +K + +D I MDIQMP  DG+ AT+ IR    N NTPIIA+TAHA+A
Sbjct: 708 VIAVNSGEEAVKQAKTRTFDLIFMDIQMPGTDGISATKQIRQGSMNRNTPIIAVTAHAIA 767

Query: 778 SEREQLLEAGMDDYMTKPVSEQALVNLLLKWTQAASDINPTPTVQQEIEDENRNQSLDWS 837
            ERE +L +GMD Y+ KP+ E AL   + +W      I        ++       +L+W 
Sbjct: 768 EERELILGSGMDGYLPKPIDEAALKAEINRW------ITRPKFTHFDL------HTLNWD 815

Query: 838 LSLKLANNNEQLAIDMLKMLVDSNFDTGRNIHAAYQSQDFDQLLQHVHKLHGASCYVGTP 897
           L L  AN+   LA+DML+ML+DS   T   I AA    D   +L  +HKLHGASCY G P
Sbjct: 816 LCLTQANHKSGLALDMLRMLLDSLPQTVSAIEAALSQNDQVTMLSTIHKLHGASCYCGVP 875

Query: 898 KLKHLSNVYETLLKKQ-QYNKLEELHEQLLAELEVVNKEAERFLKPEKAD 946
             + L    E+ LK++ +   LE    +LL EL  V   A++ L    A+
Sbjct: 876 TTQRLCQEIESALKREARVEDLEPEILELLDELTKVESAAKQVLSQLSAE 925