Pairwise Alignments

Query, 947 a.a., Signal transduction histidine kinase from Kangiella aquimarina DSM 16071

Subject, 935 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella sp. ANA-3

 Score =  583 bits (1504), Expect = e-170
 Identities = 367/952 (38%), Positives = 534/952 (56%), Gaps = 39/952 (4%)

Query: 1   MKDWGISKRIMTLALTPTILVALLLGTLFISNHINDSKYSLTARGKTIATHLALASEYGL 60
           M  + +   ++ LAL PTILV +LLG+ F  N   + + +L  +G  I   LA+ASE GL
Sbjct: 7   MTKYSLRSWVLVLALAPTILVGILLGSYFTINRFYELEDTLIEQGSNIIEPLAIASEVGL 66

Query: 61  ITLDEKNLAEMAQAARDNDKDLM-AVAIFDQNNRVLASVGSAETLSVMSIDNPYSLARSG 119
           +  D +    +  AA+ N   L+ ++AIFD  N++  +    +   +M            
Sbjct: 67  VGNDREATKRLLAAAQLNKSTLVKSIAIFDIQNQLFVTSHYHKDFEIMRYKEA------- 119

Query: 120 SSNNLMRFARTAESEQGK--LFYAPIISKFPETYESWQNYS--QANAQLLGYVAVMMTDE 175
               L    +T     G   +   PI +  P    +  N+     N +LLGY++V++  E
Sbjct: 120 ----LTNLHKTEIEHVGDSLILRTPIFATAPPAPGAPVNFDIQTDNGELLGYISVIINKE 175

Query: 176 FSAISRYNTILTTLFITLIGLLIGGFLARRMSMSVTTPIEKMVEGINRIKDGRLDTRIES 235
            + + ++   +    I LIG+ +      R+  +VT PI +MV  + +I++G+LD R+E 
Sbjct: 176 RALLEQHRAAVAAFIIVLIGVQLNLLFTFRLVKNVTQPITEMVRVVAKIREGKLDARLEG 235

Query: 236 EANAELLTLQEGINLMAENMEHNQDEMQLAVDQATEDLRETLETLEVNNLELDIARRQAL 295
               EL  L+ GIN MA ++    DEMQ  +DQAT DLRETLE +E+ N+ELD+A+++AL
Sbjct: 236 NLIGELDLLKRGINAMAGSLSEYHDEMQQNIDQATSDLRETLEQIEIQNVELDLAKKRAL 295

Query: 296 EASRVKTEFLANMSHEIRTPMNGVIGFTELLLKTELNNKQKDFLFDIKRSATSLLSIIDD 355
           EASR+K+EFLANMSHE+RTP+NGVIGF   L+KT L++ Q D++  I+RSAT+LL+II+D
Sbjct: 296 EASRIKSEFLANMSHELRTPLNGVIGFARQLVKTPLHSSQVDYINTIERSATNLLAIIND 355

Query: 356 ILDYSKIEAGKMSFERYPFDLRECVDDIFRMLGPNANKKGIELVSLIYSDVPKALLGDPI 415
           ILD+SK+EAGKM  E  PF LRE + +   ++  +A  KG+ELV  I  +VP  + GD +
Sbjct: 356 ILDFSKLEAGKMVLENMPFGLRETLGETITLISGSAQAKGLELVVDIAPNVPDNVNGDAM 415

Query: 416 RIKQIITNLVNNAIKFTKSGSVELYAEVESENKKGLKLKIQVKDSGIGLTQEQQRNLFKA 475
           R+ QII NLV NAIKFT SGSV +  E++++    + L+  V D+GIG+ + QQ  LF+A
Sbjct: 416 RVCQIINNLVGNAIKFTDSGSVLVKLELQNQTDDQVVLRCDVIDTGIGIDENQQDFLFQA 475

Query: 476 FSQADSSTKREFGGTGLGLVISKSLVEKMGGNIGVNSNQGEGSTFWFTLQCERTDALPED 535
           F QADSS  R FGGTGLGLVI+K LV +MGG IG  S+  +GS FWFTL          D
Sbjct: 476 FGQADSSISRRFGGTGLGLVITKRLVNQMGGQIGFTSSVDKGSNFWFTLPLGLGQFQIGD 535

Query: 536 GLTGEFLANKSVLVFDPHPSTRLSITQILEEWGMLVRSFEKIDDLMTEIDLYSQSGKSIE 595
            L  E L +K+VL ++P   T   I++ L++W   V   + I  L+T +   S +    +
Sbjct: 536 SLPFEKLKDKTVLFYEPRVLTHSVISRQLKQWDTKVTHHQHIPSLLTTL---STTEHQFD 592

Query: 596 LIIIGGQRFRRRQQQLEYICNKAQTQLYCPIITFTTAGNADFLEHLHSIGVNRAMTKPVT 655
            +++    F     QL    N+A+++  C I+ F      + L        +  ++ PV+
Sbjct: 593 YVLLSCHGF-SNPNQLVSTLNQAKSKTDCLIVLF-DCQEQEVLSQFIRPNADVVLSLPVS 650

Query: 656 HRALYNSLIELLKTPSIHSGKEPAEAPVGDASLLKDIYVLAVDDNPANLRLVTTLLQDLN 715
              L  +   +L  P  +    P    V  A   + + VLAVDDN ANL+L+ TLL +L 
Sbjct: 651 EHQLARN---MLYPPMEYDILPPVAITVPAAR--QSLTVLAVDDNFANLKLIDTLLNELV 705

Query: 716 IKVDAAESGMQAVSLSKNKVYDAILMDIQMPEMDGLEATRTIRANRTNLNTPIIALTAHA 775
             V A  SG +AV  +K++ +D I MDIQMP  DG+ AT+ IR    N NTPIIA+TAHA
Sbjct: 706 TTVIAVNSGEEAVKQAKSRTFDLIFMDIQMPGTDGISATKQIRQGSMNRNTPIIAVTAHA 765

Query: 776 MASEREQLLEAGMDDYMTKPVSEQALVNLLLKWTQAASDINPTPTVQQEIEDENRNQSLD 835
           +A ERE +L +GMD Y+ KP+ E AL   + +W      I        ++       +L+
Sbjct: 766 IAEERELILGSGMDGYLPKPIDEAALKAEINRW------ITRPKFTHFDL------HTLN 813

Query: 836 WSLSLKLANNNEQLAIDMLKMLVDSNFDTGRNIHAAYQSQDFDQLLQHVHKLHGASCYVG 895
           W L L  AN+   LA+DML+ML+DS   T   I  A    D   +L  +HKLHGASCY G
Sbjct: 814 WDLCLTQANHKSDLALDMLRMLLDSLPQTVSAIETALSQNDQATMLTTIHKLHGASCYCG 873

Query: 896 TPKLKHLSNVYETLLKKQ-QYNKLEELHEQLLAELEVVNKEAERFLKPEKAD 946
            P  + L    E+ LK+  +   LE    +LL EL  V   A++ L    A+
Sbjct: 874 VPTTQRLCQEIESALKRDARVEDLEPEILELLDELTKVESAAKQVLSQLSAE 925