Pairwise Alignments

Query, 295 a.a., tyrosine recombinase XerD from Kangiella aquimarina DSM 16071

Subject, 300 a.a., integrase/recombinase XerD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  348 bits (894), Expect = e-101
 Identities = 168/293 (57%), Positives = 221/293 (75%)

Query: 3   ESIIEQFCDQIWMEQGLSDATLSSYRSDLKLFNQWLQKQGKTLTNSGASDIQQYLAERYS 62
           + +I+ F D +W  +GLSD TLS+YR+DL+ F+++LQ QG  L + G +D++ YLA R  
Sbjct: 8   DPLIDAFLDDLWSSKGLSDNTLSAYRTDLRHFDRYLQSQGLRLRDVGQADVRAYLAYRVE 67

Query: 63  KQYSSRSTARFLSSARKFYRYLLQSNHIKVDPTQQIESPKIQPPVPKSLSEDEVDSLLSQ 122
           +Q++  S+AR LSS R+FY YLLQ+  I  DP  QIESPK+   +P SLSE +VD LL++
Sbjct: 68  QQFARTSSARLLSSLRRFYNYLLQTKQISGDPMAQIESPKLSRHLPDSLSESQVDRLLAE 127

Query: 123 PDLDTALGLRDKAMLELLYSSGLRITELISVEMNQIGFQQGVMRVIGKGNKERIVPIGEE 182
           P++D  +  RDKAMLELLY++GLR++EL+ + M Q+  +QG++R+IGKG KER+VP+GE 
Sbjct: 128 PNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVRIIGKGGKERLVPMGEM 187

Query: 183 ALQAIAHYIRYGRAELSKEKVTDWLFLSTRGQRMTRQTFWHRIKFYAKTAGIRKHLSPHT 242
           A+  + HY+   R EL     +D +F S R Q MTRQTFWHRIK YA  AGI   LSPHT
Sbjct: 188 AITEVEHYLTSARHELLGHIQSDVVFPSKRSQMMTRQTFWHRIKLYASRAGIETELSPHT 247

Query: 243 LRHAFATHLLNHGADLRTLQMLLGHSDLSTTQIYTYVAKERLKQLHSQHHPRG 295
           LRHAFATHLLNHGADLR +Q+LLGHSDLSTTQIYT+VA+ RL++LH QHHPRG
Sbjct: 248 LRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG 300