Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) from Kangiella aquimarina DSM 16071

Subject, 455 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  365 bits (936), Expect = e-105
 Identities = 207/454 (45%), Positives = 283/454 (62%), Gaps = 10/454 (2%)

Query: 1   MIPLSLKTIAQVTDGQLQGPEKTIEKVVTDSRVDCRDALFVALIGENFDGHKFVGKAKAE 60
           MIPLSL  +A  T G+L G +  +  + +DSR     +LFVAL GE FDGH+F   A A 
Sbjct: 1   MIPLSLTQLAAATHGRLCGEDVVVSHLDSDSRKMTVGSLFVALKGERFDGHEFAEAAAAA 60

Query: 61  GAIALLVEHAVDSDLPQVIVADTSKALGAIAGYVRDQVNPFVIGITGSAGKTTVKEMVAS 120
           GA ALLVE  +   LPQ++VADT KA+G I   VRD VNP  + +TGS GKT+VKEMVA+
Sbjct: 61  GASALLVERELPLALPQLVVADTQKAMGQIGALVRDSVNPVCVALTGSNGKTSVKEMVAT 120

Query: 121 ILRQKGNLLATQGNFNNHIGVPLTLLRLKATDQFAVIEMGANHVGEIAYCASIAKPDVSV 180
           +L Q  ++L T GNFNN IGVPLTLLRL+   ++ V E+GANH GEI Y +S+ +P VS+
Sbjct: 121 VLSQHHSVLFTAGNFNNEIGVPLTLLRLEQGHEYGVFELGANHKGEIDYTSSLVRPSVSL 180

Query: 181 INNVEAAHIEGFGSIEGVSKAKSEIYEGLSEEGTAVINLDSAFADDWAERFNSLHKVTVS 240
           +NNV +AH+EGFGS  GV++AKSEIY  L+++G  ++NLD  +A+    +      +T  
Sbjct: 181 VNNVGSAHLEGFGSEAGVAEAKSEIYLHLAQDGVGIVNLDDRYAETMLNKLKGKRVLTFG 240

Query: 241 RHKDANFVADNCQLQANGNVLFEMQHTQDGSSQTISVQLPVPGMHNVSNALVAAALASVA 300
               A   A      A G   F + H  D     ++V LP+ G H VSNAL  AA+    
Sbjct: 241 LGAGAEITAREVTADAFGRYSFYLCHGGD----HVTVSLPLAGKHQVSNALATAAICIAL 296

Query: 301 GADMEMIKNGLETMVSVKGRLNQLKAANGALIIDDTYNASVPAVKAAIDYLATLSGTKLL 360
           G  ++ I  GL  +  VKGR+   +     L++DD+YNA+  +V AAID+L  +S  + L
Sbjct: 297 GLPLQEIAAGLAKLAPVKGRM-MPRQLGRLLLVDDSYNANPNSVGAAIDWLKEISTNRTL 355

Query: 361 VLGDMAELGDDSERYHREVGEYAKDRKIDRLLVCGEWVKHSAEAFGEKAHWFETKDLLVS 420
           VLGD+ ELGD++   H E+G+ AK+  +D L   G   +H+++AFG K   FE  D LVS
Sbjct: 356 VLGDLGELGDNAALLHFELGQKAKEAGLDSLFCLGSLSRHASQAFGSK--HFEELDALVS 413

Query: 421 YLKSI---MQSDYKILVKGSRSARMEQVVDALVA 451
            L +    ++ D  +LVKGSRSA ME+VV+AL A
Sbjct: 414 ELINYINGVEGDVTLLVKGSRSAAMERVVEALTA 447