Pairwise Alignments

Query, 528 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) from Kangiella aquimarina DSM 16071

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  355 bits (911), Expect = e-102
 Identities = 210/521 (40%), Positives = 301/521 (57%), Gaps = 37/521 (7%)

Query: 9   AALKKIIKPVVSEQLWKDF--PQLASIEVNGLQLDSRQIKAGEMFVAYPGHATDGREYIQ 66
           +A+ ++I P      W +   P+LA++ +  L+LDSR IK+G+ FVA  GHA DGR++I 
Sbjct: 22  SAISELIAP------WLELTDPKLAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFID 75

Query: 67  QAVDSGASVVLFEQDGSETIFKTLLNDNQQVAASAKTLSGVYNYKEAV-LIPVKNLSQNV 125
           +A+  GA++VL E D                   A+ L+G   Y+  V +I +  L Q++
Sbjct: 76  KAIAQGANLVLAEAD-------------------AQHLNGWVEYRAGVPVIYLAELGQHL 116

Query: 126 SLIAARFYGNPTKKMSVIGVTGTNGKTSCAYLLAQALEFLQYPTLMLSTVGNGNPNELKA 185
           S +A R YG    ++  IGVTGTNGKT+   L+AQ LE L +   ++ T GNG  N L+ 
Sbjct: 117 SELAGRLYGGHHNQL--IGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEP 174

Query: 186 TENTTPDAIAIQRLAAEYLQQKNYHMTMEVSSHGLVQSRVAAVAYKVAIFTNLSQDHLDY 245
             NTT +A+ IQ    +  ++   +  +E SSHGLVQ RV  + +   +F+NLS+DHLDY
Sbjct: 175 AANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDY 234

Query: 246 HGDMESYFQAKRELFISENLQVAVINADDEYGRRLLADEQISCRKIAYSCKEKNDSLNIS 305
           HG ME+Y  AK  LF     Q A+IN DD  G + +  +Q+  + I  S   K    N +
Sbjct: 235 HGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQWV--KQLP-QAIGVSLVTKP---NTA 288

Query: 306 DWVVAQNQMFNMKGIQAELHTPWGTSKLRSGLLGHFNLSNLLAVASALGFLFGDINKWIV 365
             + A+   +   GI     + WG  +L + L+G FN  NLL   + L  L  + +  + 
Sbjct: 289 QAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSLGFEKSALLA 348

Query: 366 ALNAAKAVPGRMQSFTKAGKATVVVDYAHTPDALDKTLGSLREHCDGDLWCVFGCGGDRD 425
                + V GRM+ F +  KA +VVDYAHTPDAL+K L +LR HC G LW + GCGGDRD
Sbjct: 349 TAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQLWAIVGCGGDRD 408

Query: 426 NTKRPLMGGVAEQKANHVIITDDNPRTENADNIVDMIRQGMSNKNAEYIQ-KRKEAIKFA 484
             KRP+M  +AEQ A+ VI+TDDNPR+E+   IV  +  G++     +I+  R +A  +A
Sbjct: 409 RGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERAHIEHHRFQAASYA 468

Query: 485 LTHSAANDMILVAGKGHEDYQQIGTKKIHYSDLETVADLME 525
           L H+ A D+IL+AGKGHEDYQ +  + IHYSD ET   L+E
Sbjct: 469 LQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLLE 509