Pairwise Alignments

Query, 528 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) from Kangiella aquimarina DSM 16071

Subject, 494 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  236 bits (603), Expect = 1e-66
 Identities = 172/495 (34%), Positives = 241/495 (48%), Gaps = 31/495 (6%)

Query: 38  LQLDSRQIKAGEMFVAYPGHATDGREYIQQAVDSGASVVLFEQDGSETIFKT-LLNDNQQ 96
           ++ DSR++  G++FVA PG A +G          GA V     DG++ I K         
Sbjct: 20  IRTDSRKVGRGDVFVAVPGVAANG----------GAGV-----DGADFIVKAWAAGAGAV 64

Query: 97  VAASAKTLSGVYNYKEAVLIPVKNLSQ-NVSLIAARFYGNPTKKMSVIGVTGTNGKTSCA 155
           V   A+  + + +  E  ++   +  +  + L+    YG       V+ VTGTNGKT+  
Sbjct: 65  VCLPARVEAALADAPEGAVVAAHDDPRVAIGLLGQARYGTDALPFPVVAVTGTNGKTTIT 124

Query: 156 YLLAQALEFLQYPTLMLSTVGNGNPNELKATENTTPDAIAIQRLAAEYLQQKNYHMTMEV 215
           YLL      L     +L TV    P        TTPD I    +             MEV
Sbjct: 125 YLLDHVFSALGRRAGVLGTVSYRWPGFAMDAPLTTPDCIETHAMLGRMRDAGVDVALMEV 184

Query: 216 SSHGLVQSRVAAVAYKVAIFTNLSQDHLDYHGDMESYFQAKRELF--ISENLQVAVINAD 273
           SSH L Q RVA + +  AI TNL+QDHLDYHGDME Y+ AK  LF  + +  +   +NAD
Sbjct: 185 SSHALDQRRVAGIRFAGAILTNLTQDHLDYHGDMEHYYAAKARLFTELPDADKACAVNAD 244

Query: 274 DEYGRRLLADEQISCRKIAYSCKEKNDSLNISDWVVAQNQMFN--MKGIQAELHTPWGTS 331
           D +GRRLL +       I +     N    +S       +M      G+   +       
Sbjct: 245 DAWGRRLLGEVP---HAIGFGLDAGNA---VSGRRFLHGEMVRNATSGLTLRMTYEGRQW 298

Query: 332 KLRSGLLGHFNLSNLLAV-ASALGFLFGDINKWIVALNAAKAVPGRMQSFTKAGKATVVV 390
           +L S L+G  N SNLLAV A  LG   G   +   +L     VPGR++         + V
Sbjct: 299 ELSSHLVGAHNASNLLAVQAVCLGM--GLAPQDFASLAGFTGVPGRLERIVNPRGLDIFV 356

Query: 391 DYAHTPDALDKTLGSLREHCDGDLWCVFGCGGDRDNTKRPLMGGVAEQKANHVIITDDNP 450
           DYAHTPDAL+  L +LR      +  VFGCGG+RD TKRPLMG    + A+  ++T DNP
Sbjct: 357 DYAHTPDALENVLRALRAVGFSRIVTVFGCGGNRDRTKRPLMGQAVARHADVAVLTSDNP 416

Query: 451 RTENADNIVDMIRQGMSN-KNAEYIQKRKEAIKFALTHSAANDMILVAGKGHEDYQQIGT 509
           R E+ + I+  +  G++  +       R  AI  AL      D++LVAGKGHE YQQIG 
Sbjct: 417 RHEDPEAIMADVLPGLAGARKVVSDADRARAIGKALALLQPGDVLLVAGKGHESYQQIGD 476

Query: 510 KKIHYSDLETVADLM 524
           +K+ YSD + + +++
Sbjct: 477 RKVPYSDQQVIREIL 491