Pairwise Alignments

Query, 528 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) from Kangiella aquimarina DSM 16071

Subject, 491 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  338 bits (868), Expect = 2e-97
 Identities = 202/503 (40%), Positives = 284/503 (56%), Gaps = 26/503 (5%)

Query: 27  FPQLASIEVNGLQLDSRQIKAGEMFVAYPGHATDGREYIQQAVDSGASVVLFEQDGSETI 86
           FP         L LDSR I+ G++F+A PGH  DGR++I +A+  GA+ VL   D  +  
Sbjct: 11  FPYAGEQTFLDLTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDNPQEQ 70

Query: 87  FKTLLNDNQQVAASAKTLSGVYNYKEAVLIPVKNLSQNVSLIAA-RFYGNPTKKMSVIGV 145
            K ++ +                  + V I    L+++VS +AA R+       M ++G+
Sbjct: 71  GKVIVAE------------------QGVQIYFYELAKHVSAVAAVRYPVIQGHAMGIVGI 112

Query: 146 TGTNGKTSCAYLLAQALEFLQYPTLMLSTVGNGNPNELKATENTTPDAIAIQRLAAEYLQ 205
           TGTNGKTS + L AQ +  L     ++ T+GNG   EL  + NTT DAI + R   E+  
Sbjct: 113 TGTNGKTSTSQLCAQLVTLLSGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFAN 172

Query: 206 QKNYHMTMEVSSHGLVQSRVAAVAYKVAIFTNLSQDHLDYHGDMESYFQAKRELFISENL 265
           +      MEVSSHGLVQ RV AV + VA+FTNL++DHLDYHGDME+Y  AK+ LF  ++L
Sbjct: 173 KGVNTCAMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAAAKQMLFRFDSL 232

Query: 266 QVAVINADDEYGRRLLAD-EQISCRKIAYSCKEKNDSLNISDWVVAQNQMFNMKGIQAEL 324
           +  ++N DD  G   LA+ + +  +   +S +    +         +N  FN +G+QA L
Sbjct: 233 RHGLLNLDDPIGGAWLAELKNVPAKIWGFSIEAHKAAA-----FYTKNVRFNDQGVQATL 287

Query: 325 HTPWGTSKLRSGLLGHFNLSNLLAVASALGFLFGDINKWIVALNAAKAVPGRMQSFTKAG 384
             P G   + S LLG FNLSNLLA  SAL     D+      +     V GRM+ FT A 
Sbjct: 288 VWPEGEIDISSPLLGAFNLSNLLAALSALYLQGMDMRALAAKVPYLVPVAGRMERFTTAD 347

Query: 385 KATVVVDYAHTPDALDKTLGSLREHCDGDLWCVFGCGGDRDNTKRPLMGGVAEQKANHVI 444
             T+VVDYAHTPDA+++ L +LR HC G LWCVFGCGGDRD  KRPLMG  AEQ A+ ++
Sbjct: 348 NITLVVDYAHTPDAIEQALNALRRHCAGVLWCVFGCGGDRDKGKRPLMGQAAEQFADRIM 407

Query: 445 ITDDNPRTENADNIVDMIRQGMSNKNAEYIQ-KRKEAIKFALTHSAANDMILVAGKGHED 503
           +T DN R+E+ + I+  I QG+++      +  R  AIK  +  + + D+IL+AGKGHE 
Sbjct: 408 VTSDNARSEDPNQIITDIIQGLTHPERALTEVDRVAAIKQVVAQAKSGDVILLAGKGHET 467

Query: 504 YQQIGTKKIHYSDLETVADLMEE 526
           YQ+    +  Y +      L E+
Sbjct: 468 YQEAAGVRHDYDERALARQLSEQ 490