Pairwise Alignments

Query, 528 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) from Kangiella aquimarina DSM 16071

Subject, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  343 bits (880), Expect = 8e-99
 Identities = 203/503 (40%), Positives = 290/503 (57%), Gaps = 26/503 (5%)

Query: 27  FPQLASIEVNGLQLDSRQIKAGEMFVAYPGHATDGREYIQQAVDSGASVVLFEQDGSETI 86
           FP         L LDSR I+ G++F+A PGH  DGR++I +A+  GA+ VL   D     
Sbjct: 12  FPYAGEQTFLELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDK---- 67

Query: 87  FKTLLNDNQQVAASAKTLSGVYNYKEAVLIPVKNLSQNVSLIAA-RFYGNPTKKMSVIGV 145
               +++  +V A+ + +  +Y Y+         L++ VS +AA R+     + M ++G+
Sbjct: 68  ----IDEQGKVIATEQGVQ-IYFYQ---------LARQVSAVAAVRYPVVQGQSMGIVGI 113

Query: 146 TGTNGKTSCAYLLAQALEFLQYPTLMLSTVGNGNPNELKATENTTPDAIAIQRLAAEYLQ 205
           TGTNGKTS + L AQ +  L+    ++ T+GNG   EL  + NTT DAI + R   E+  
Sbjct: 114 TGTNGKTSTSQLCAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFAD 173

Query: 206 QKNYHMTMEVSSHGLVQSRVAAVAYKVAIFTNLSQDHLDYHGDMESYFQAKRELFISENL 265
           +      MEVSSHGLVQ RV AV + VA+FTNL++DHLDYHGDME+Y +AK+ LF  ++L
Sbjct: 174 KGVNTCAMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSL 233

Query: 266 QVAVINADDEYGRRLLAD-EQISCRKIAYSCKEKNDSLNISDWVVAQNQMFNMKGIQAEL 324
              ++N DD  G   L++   +  +   +S +   +          +N  FN +G+QA L
Sbjct: 234 LHGLVNLDDPVGAAWLSELANVPAKMWGFSIEAHTEVA-----FYTKNAQFNDQGVQATL 288

Query: 325 HTPWGTSKLRSGLLGHFNLSNLLAVASALGFLFGDINKWIVALNAAKAVPGRMQSFTKAG 384
             P G   +RS LLG FNLSNLLA  SAL     D+      +     V GRM+ FT A 
Sbjct: 289 VWPEGEVDIRSPLLGAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTAD 348

Query: 385 KATVVVDYAHTPDALDKTLGSLREHCDGDLWCVFGCGGDRDNTKRPLMGGVAEQKANHVI 444
             T+VVDYAHTPDA+++ L +LR HC G+LWCVFGCGGDRD  KRPLMG  AEQ A+ ++
Sbjct: 349 NITLVVDYAHTPDAIEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIM 408

Query: 445 ITDDNPRTENADNIVDMIRQGMSNKNAEYIQ-KRKEAIKFALTHSAANDMILVAGKGHED 503
           +T DN R+E+ + I+  I QG+++      +  R  AIK  +  +   D+IL+AGKGHE 
Sbjct: 409 VTSDNARSEDPNQIITDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHET 468

Query: 504 YQQIGTKKIHYSDLETVADLMEE 526
           YQ+    +  Y +      L E+
Sbjct: 469 YQEAAGVRHDYDERALARQLSEQ 491