Pairwise Alignments

Query, 727 a.a., C-terminal peptidase (prc) from Kangiella aquimarina DSM 16071

Subject, 682 a.a., carboxyl-terminal protease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  494 bits (1272), Expect = e-144
 Identities = 278/666 (41%), Positives = 407/666 (61%), Gaps = 31/666 (4%)

Query: 44  SIKPENKFRETGRVISFLLMQSHYEHPDFDDELSEEAYNQFLKALDPNRSYFYQKDIEQL 103
           ++K E + +   + ++ L  +SHY     DD  S + ++++L+ LD  R+   Q D++  
Sbjct: 34  TLKQEAQHKVASKRVTDLYTRSHYHRFALDDAFSAQIFDRYLQQLDYRRNVLTQADVDSF 93

Query: 104 NDYKTLFDDALRTGRIELAYDFFALFEERFRDRYMFALEQLKKPLDFNSESE-FEYDRRE 162
             Y   FDD L +G ++ AY  F L ++R  + +++AL  L K +DF +  + ++YDR +
Sbjct: 94  KPYINQFDDMLSSGELDPAYKMFDLVQKRRYEGFVYALSLLDKEMDFTAPGDVYDYDRED 153

Query: 163 SPWPKDEKEMNEIWKKRVLNDALNLKLAEQTDEQIKEKLSKRYESAIRRLSQTKSEDVFG 222
             WPKD+ E+NE+W++RV  DALNLKL  +   +I + L KRY +AI+RL+QT SEDVF 
Sbjct: 154 VAWPKDQAEINELWRQRVKYDALNLKLTGKKWLEIVDILQKRYNNAIKRLTQTNSEDVFQ 213

Query: 223 YFMNSVSAAIDPHTNYYTPRQFENFTINMSLKLQGIGAVLTQEDMFTKIVSIVNKGPADK 282
             MN+ S +I+PHT+Y +PR  E F + M+L L+GIGA L  ED +T I S++  GPA  
Sbjct: 214 AVMNAFSRSIEPHTSYLSPRNAERFQMEMNLSLEGIGAQLQLEDDYTVIKSLIAGGPAAG 273

Query: 283 SGQVHPNDKIIGVAQGEKGEMVDVIGWRNDDVVDLIRGEAGSIVRLQIIPYTKSGDGMPK 342
           S ++ P DKI+GV Q E GE+VDVIGWR DDVV+LI+G  GS V LQI+P     +  P 
Sbjct: 274 SEKLSPEDKIVGVGQ-EGGEIVDVIGWRLDDVVELIKGPKGSKVVLQILPKKGGSNAKPF 332

Query: 343 VVSLVREEIKLEDQAAKSKVLEVEQ-YDKNFKMGVIELPSFYSESVASNSDGKSEITSTT 401
            V+LVR++I+LED+AA SK++E +     N K+GVI++P FY               + +
Sbjct: 333 NVTLVRDKIRLEDRAATSKIIEPKDGVYANRKVGVIQIPGFYM--------------NLS 378

Query: 402 KDVAKLIKELDKQDIDGLVIDLRNNGGGSLSEVVNLVGLFIDKGPVVQGRDSRGRLRILR 461
           +DV K + +L++  ++G+VIDLR NGGG+L+E V L GLFID GPVVQ RD+ GR+   R
Sbjct: 379 QDVEKELLKLNEAKVEGVVIDLRGNGGGALTEAVLLTGLFIDMGPVVQVRDADGRVSAHR 438

Query: 462 DTDSGVAYHGPLAVLVNGGSASASEIFAGAIQDYGRGIVLGENTFGKGTVQSVADLNQYI 521
           D D    Y GPL V+V+  SASASEIFA A+QDY R +++GE++FGKGTVQ    L +  
Sbjct: 439 DNDGKTTYTGPLTVMVDRYSASASEIFAAALQDYDRALIVGESSFGKGTVQQHKSLGRIY 498

Query: 522 RNPETQVGALKLTVEKYYRITGESTQNKGVKPDIEFPTIFDVEEYGESSYDNALAWDTIK 581
              E  +G ++ T++K+YRI G STQ KGV P+I +P+  +  EYGE+   NAL WD + 
Sbjct: 499 DMYEKPIGHVQYTIQKFYRINGGSTQLKGVTPNIAYPSALEPGEYGEAEEKNALPWDKVP 558

Query: 582 STNFQKTEGL-QEVIPFLRSKHHERKTSSQEFSFLEEDITRATERRDEKVVSLNYEKRLA 640
              +     +  E++  L  KH  R  +S EF+++ +DI    +   EK VSL   +R+A
Sbjct: 559 MAQYGTLNDITPELVASLEKKHLARIQNSVEFNYINQDIADFKKHHKEKTVSLVESERIA 618

Query: 641 ERKRNDDIRLERENLRRKIEGLEPLEQLASEEDGEEAESSDITDIVDEDQKDLFLKEAAN 700
            R+ ++   L+R N RR   GL P++ +            DI D  D    D FL E A 
Sbjct: 619 SREADEKKVLDRTNERRVANGLAPVKSM-----------EDIKD--DVVAPDAFLDETAY 665

Query: 701 ILSDLI 706
           I  D++
Sbjct: 666 ITLDMV 671