Pairwise Alignments

Query, 727 a.a., C-terminal peptidase (prc) from Kangiella aquimarina DSM 16071

Subject, 445 a.a., carboxyl-terminal protease (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  166 bits (420), Expect = 2e-45
 Identities = 126/378 (33%), Positives = 198/378 (52%), Gaps = 48/378 (12%)

Query: 182 NDALNLKLAEQTD--EQIKEKLSKRYESAIRRLSQTKSEDVFGYFMNSVSAAIDPHTNYY 239
           ++A N  + EQ D    I E++  +Y      + Q    ++    +N +  ++DPH++Y 
Sbjct: 30  DNARNTSVYEQLDLFGDIFERIRAQY------VEQVDEGELIEAAINGMLTSLDPHSSYL 83

Query: 240 TPRQFENFTINMSLKLQGIGAVLTQEDMFTKIVSIVNKGPADKSGQVHPNDKIIGVAQGE 299
            P+ F +  +    +  G+G  +TQED F K+VS ++  PA ++G +   D I  V  GE
Sbjct: 84  APKDFGDMQVQTRGEFGGLGIEVTQEDGFVKVVSPIDDTPAAEAG-IEAGDFITHV-DGE 141

Query: 300 KGEMVDVIGWRNDDVVDLIRGEAGSIVRLQIIPYTKSGDGMPKVVSLVREEIKLEDQAAK 359
                 V+G   D  V ++RG  GS +   +I   + G   P  V++ R+ IKL   A +
Sbjct: 142 S-----VLGLTLDAAVTMMRGPVGSEI---VITVVREGFDEPFDVTITRDTIKLT--AVR 191

Query: 360 SKVLEVEQYDKNFKMGVIELPSFYSESVASNSDGKSEITSTTKDVAKLIKELDKQDIDGL 419
           S+V+            V+ + +F  ++  +  +  +E      +VA+L      + + G 
Sbjct: 192 SRVVR--------DTVVMRITTFNDQTFPNLEEKMAE------EVAELG---GMEAVSGF 234

Query: 420 VIDLRNNGGGSLSEVVNLVGLFIDKGPVV--QGRDSRGRLRILRDTDSGVAYHGPLAVLV 477
           VIDLRNN GG L++ + +   F+DKG +V  +GRD +   R    T   +A   P+ VL+
Sbjct: 235 VIDLRNNPGGLLTQAIKVSDAFLDKGEIVSTRGRDPQDGERF-NATPGDLAEGKPIVVLI 293

Query: 478 NGGSASASEIFAGAIQDYGRGIVLGENTFGKGTVQSVADLNQYIRNPETQVGALKLTVEK 537
           NGGSASASEI AGA+QD+ R IV+G  +FGKG+VQSV         P    GA++LT  +
Sbjct: 294 NGGSASASEIVAGALQDHRRAIVVGTKSFGKGSVQSVV--------PLRGDGAMRLTTAR 345

Query: 538 YYRITGESTQNKGVKPDI 555
           YY  +G S Q+ GV PDI
Sbjct: 346 YYTPSGRSIQSLGVSPDI 363



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 60 FLLMQSHYEHPDFDDELSEEAYNQFLKALDPNRSYFYQKD 99
          F  +++ Y     + EL E A N  L +LDP+ SY   KD
Sbjct: 48 FERIRAQYVEQVDEGELIEAAINGMLTSLDPHSSYLAPKD 87