Pairwise Alignments

Query, 451 a.a., Predicted exonuclease of the beta-lactamase fold involved in RNA processing from Kangiella aquimarina DSM 16071

Subject, 481 a.a., RNA-metabolising metallo-beta-lactamase (RefSeq) from Shewanella loihica PV-4

 Score =  270 bits (690), Expect = 8e-77
 Identities = 168/448 (37%), Positives = 253/448 (56%), Gaps = 19/448 (4%)

Query: 1   MRITFLGGTETVTGSKFLLETERTKVLIDCGLYQGYKWLRERNWQSLPLDIDKLDAVLLT 60
           M ++FLG  + VTGS  LL+    +VL+DCGL QG K    RN +    +  ++ AV+L+
Sbjct: 3   MTLSFLGAAQEVTGSCHLLDISGRQVLLDCGLIQGGKLDALRNHEPFLFEPTEIHAVVLS 62

Query: 61  HAHLDHSGYIPVLYKHGFRGPVFTHHATKALCQILLADSGHIQEEDAKYYSKHKLSKREQ 120
           HAH+DHSG +P+L K GF GP++TH AT  LC+++L D+  +Q  D +  +K ++     
Sbjct: 63  HAHIDHSGRLPLLVKSGFTGPIYTHKATVELCEVMLRDAAMLQVRDVERLNKKRVKMDLP 122

Query: 121 P-EPLYDRHTAESSMALFQSVDFDEQVE-VGDIRFHLQPAGHILGAASIIV----EAEGK 174
           P EPL+D       +  F ++D+ + V+ V  +   L  AGHILG+A + +     +E K
Sbjct: 123 PLEPLFDEEDVALVIKQFVALDYGQSVKVVPQLTACLSDAGHILGSAVVELWLGEGSERK 182

Query: 175 RIGFSGDVGRFDDLLMRPPRPLPELDLLLMESTYGNRQHNPQD--AAQQLASVVNRVAKS 232
           ++ FSGD+GR    ++  P  + + DL+LMESTYG+R H   D   A+  A     + +S
Sbjct: 183 KLVFSGDLGRAGMPILDDPTLIDDADLVLMESTYGDRLHRSWDDTLAELKAIFAKTIKES 242

Query: 233 GSVLLVPAFAVGRAQALQHLLANLMEQGAIPKLPIYLDSPMAIKVSDIFC--------HF 284
              +L+PAF+VGRAQ L +L     ++ A+    I LDSPMAIK + I+          F
Sbjct: 243 RGNILLPAFSVGRAQELLYLFHLYAKEWALSNWRICLDSPMAIKATQIYVANYQLMDEDF 302

Query: 285 SDQHHLSHEQCHHMCDLVTYTRTVDESKALAGQAFPHIIIAGSGMATGGRILHHFKRLLS 344
                LS  + H +   V +  +  ES  L       IIIAGSGM  GGRI  H +  L+
Sbjct: 303 KRFTRLSPGK-HPLLSNVDFIDSTQESMELNEIHQGLIIIAGSGMCNGGRIRSHLEHNLA 361

Query: 345 DSRTMVLFTGYQAGGTRGAKMLEGVDAVKIHGNWIPLRAEVDEISGLSGHADYLELTKWL 404
           + ++ V+  G+QA GT G  +++G +++ IHG  IP++A++  + GLS HAD  EL  W 
Sbjct: 362 NPQSDVIICGFQALGTPGRLLVDGAESLTIHGRDIPVKAKIHTVGGLSAHADQAELIHWY 421

Query: 405 HQSKLTKTTPIKLIHGDPEALEGLRVHL 432
              K   T P+ LIHG+ EA + L+  L
Sbjct: 422 RHFK--HTPPLILIHGEREAQQRLKAEL 447