Pairwise Alignments

Query, 451 a.a., Predicted exonuclease of the beta-lactamase fold involved in RNA processing from Kangiella aquimarina DSM 16071

Subject, 478 a.a., metallo-beta-lactamase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  259 bits (662), Expect = 1e-73
 Identities = 172/469 (36%), Positives = 255/469 (54%), Gaps = 20/469 (4%)

Query: 1   MRITFLGGTETVTGSKFLLETERTKVLIDCGLYQGYKWLRERNWQSLPLDIDKLDAVLLT 60
           M + FLG    VTGS  L+      +L+DCGL QG K    RN +    D   + AV+L+
Sbjct: 1   MTLQFLGAAREVTGSCHLVTVAGKHLLLDCGLIQGGKADELRNHEPFVFDPQTIVAVVLS 60

Query: 61  HAHLDHSGYIPVLYKHGFRGPVFTHHATKALCQILLADSGHIQEEDAKYYSKHKLSKREQ 120
           HAH+DHSG +P+L K GF GP++TH AT  LC I+L D+  +Q  D +  +K +      
Sbjct: 61  HAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQVRDTERTNKKRAKHDLA 120

Query: 121 P-EPLYDRHTAESSMALFQSVDFDEQVEV-GDIRFHLQPAGHILGAASI-IVEAEG---K 174
           P EPL+    AE +++ F S+++ +   V   +   L  AGHILG+A + +   EG   K
Sbjct: 121 PLEPLFTVEDAEQAISQFVSLEYGQVTRVIPHVDICLSDAGHILGSALVELWLGEGKSQK 180

Query: 175 RIGFSGDVGRFDDLLMRPPRPLPELDLLLMESTYGNRQHNP-QDAAQQLASV-VNRVAKS 232
           +I FSGD+GR    +++ P  +   DL+LMESTYGNR H    D   +L  +    V +S
Sbjct: 181 KIVFSGDLGRAGMPILQNPTLVDTADLVLMESTYGNRFHRSWTDTLAELKDIFAKTVNES 240

Query: 233 GSVLLVPAFAVGRAQALQHLLANLMEQGAIPKLPIYLDSPMAIKVSDIFCH---FSDQHH 289
              +L+PAF+VGRAQ L +L     ++  + +  I LDSPMAI+ + ++ +     D+  
Sbjct: 241 QGNILLPAFSVGRAQELLYLFHLYAKEWDLGRWKICLDSPMAIEATRVYVNNYPLMDEDF 300

Query: 290 ----LSHEQCHHMCDLVTYTRTVDESKALAGQAFPHIIIAGSGMATGGRILHHFKRLLSD 345
                 H   H +   V + +T +ES AL       IIIAGSGM  GGRI  H +  L  
Sbjct: 301 KRFTRQHPGQHPLLSNVEFIQTTEESIALNEVHKGLIIIAGSGMCNGGRIRSHLEHNLWR 360

Query: 346 SRTMVLFTGYQAGGTRGAKMLEGVDAVKIHGNWIPLRAEVDEISGLSGHADYLELTKWLH 405
           S   V+  G+QA GT G  +++G   + IHGN + + A++  + GLS HAD  EL +W  
Sbjct: 361 SECDVIICGFQALGTPGRALVDGAKELTIHGNSVNVAAKLHTVGGLSAHADQAELLRWYR 420

Query: 406 QSKLTKTTPIKLIHGDPEALEGLRVHLQEHTQFK---VDVAGYRDILSL 451
                +  P+ L+HG+PEA +GL   + +  + K   + +A   D+L L
Sbjct: 421 H--FEEQPPLVLVHGEPEAQQGLVAVMNQDPKTKPKALAIATRGDMLDL 467