Pairwise Alignments

Query, 271 a.a., exodeoxyribonuclease III from Kangiella aquimarina DSM 16071

Subject, 270 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Pseudomonas fluorescens FW300-N1B4

 Score =  339 bits (870), Expect = 3e-98
 Identities = 156/268 (58%), Positives = 202/268 (75%), Gaps = 2/268 (0%)

Query: 1   MKIVTFNINSIRTRAHQIEALVEKHDPDIICIQETKVHDDAFPFELYEHLGYHIEIHGGK 60
           MKIV+FNIN +R R HQ+ AL+EKH+PD+I +QETKVHDD FP    + LGYH+  HG K
Sbjct: 1   MKIVSFNINGLRARPHQLAALIEKHNPDVIGLQETKVHDDQFPLAEVQALGYHVHFHGQK 60

Query: 61  AHYGVATFSKQKPLAVEKGFPTDPDDAQRRMIITSFQYGNEV-IKVLNGYFPQGENREHP 119
            HYGVA  S+Q+P+A+ KGF TD +DAQRR I  +F   N V + ++NGYFPQGE+R+HP
Sbjct: 61  GHYGVALLSRQEPIALYKGFATDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP 120

Query: 120 VKFPYKQKFYADLLTYLQND-KGDHRTIVLGDINISPEDIDIGIGEPNRKRWLRDGKCSF 178
            KFP K++FY+DL   L++    D   +V+GD+NISPED DIGIG  N KRWL+ GKCSF
Sbjct: 121 TKFPAKERFYSDLQQLLESQFSNDQPIVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF 180

Query: 179 LPEEREWLQKILATGLHDTYRTINPDVDDKFSWFDYRSRGFERDPKRGLRIDSVFACDWL 238
           LPEEREW+ ++   GL D++R ++PDV D+FSWFDYRSRGFE +PKRGLRID + A   L
Sbjct: 181 LPEEREWMARLKNWGLVDSFRLLHPDVADRFSWFDYRSRGFEDEPKRGLRIDLIMASHGL 240

Query: 239 NDRAVASDIDYEIRSMERPSDHAPVWTE 266
             R   + +DY++R+ME+PSDHAP+W E
Sbjct: 241 LPRVKDAGVDYDLRAMEKPSDHAPIWLE 268