Pairwise Alignments

Query, 339 a.a., Holliday junction DNA helicase subunit RuvB from Kangiella aquimarina DSM 16071

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Sinorhizobium meliloti 1021

 Score =  397 bits (1020), Expect = e-115
 Identities = 199/332 (59%), Positives = 252/332 (75%), Gaps = 2/332 (0%)

Query: 1   MIEHDRIITPSEFADEDQFDRAIRPTTLDEYVGQEKVREQMEIFLGAAKKRQEALDHVLI 60
           M E  R+I P +  ++   D  +RP TLDE+ GQ + R  ++IF+ AA+ R EALDHVL 
Sbjct: 1   MSEAARLIAPEKRGED--LDATMRPQTLDEFTGQAEARANLKIFIEAARNRGEALDHVLF 58

Query: 61  FGPPGLGKTTLSNIIANEMGVGIKHTSGPVLEKAGDLAAMLTNLEPNDVLFIDEIHRLSP 120
            GPPGLGKTTL+ I+A E+GV  + TSGPV+ KAGDLAA+LTNLE  DVLFIDEIHRL+P
Sbjct: 59  VGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNP 118

Query: 121 HVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGLLTSPLRDRFGIVQR 180
            VEE+LYPAMED+QLD++IGEGPAARS+KIDL  FTLV ATTR GLLT+PLRDRFGI  R
Sbjct: 119 AVEEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVR 178

Query: 181 LEFYNLKDLTHIVMRSARILDLPIEEKGALEIARRSRGTPRIANRLLRRVRDYAEIKSDG 240
           L FY +++L  IV R AR++ L + ++GA EIARR+RGTPRIA RLLRRVRD+AE+    
Sbjct: 179 LNFYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVARAE 238

Query: 241 VITQNISDRALDMLDVDHKGFDMMDRKLLLTIIEKFAGGPVGLDTLAAAIGEERDTIDEV 300
            +T  I+D AL  L VD  G D +DR+ L  I + F GGPVG++T+AA + E RD I+++
Sbjct: 239 AVTLKIADEALTRLLVDSMGLDQLDRRYLTMIAQNFGGGPVGIETIAAGLSEPRDAIEDI 298

Query: 301 LEPFLIQQGFIQRTPRGRIATKLAYQHFEIIP 332
           +EP+LIQQGFIQRTPRGR+ T  A++H  + P
Sbjct: 299 IEPYLIQQGFIQRTPRGRVLTANAWKHLGLNP 330