Pairwise Alignments

Query, 339 a.a., Holliday junction DNA helicase subunit RuvB from Kangiella aquimarina DSM 16071

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  409 bits (1050), Expect = e-119
 Identities = 199/329 (60%), Positives = 259/329 (78%), Gaps = 6/329 (1%)

Query: 16  EDQFDRAIRPTTLDEYVGQEKVREQMEIFLGAAKKRQEALDHVLIFGPPGLGKTTLSNII 75
           E + D A+RP +L ++VGQ + RE + +F+ AA+ R EA+DHVL  GPPGLGKTTL+ I+
Sbjct: 18  EGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHGPPGLGKTTLAQIV 77

Query: 76  ANEMGVGIKHTSGPVLEKAGDLAAMLTNLEPNDVLFIDEIHRLSPHVEEVLYPAMEDYQL 135
           A E+GVG + TSGP++ KAGDLAA+LTNLEP DVLFIDEIHRL+P +EEVLYPAMED+QL
Sbjct: 78  ARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAIEEVLYPAMEDFQL 137

Query: 136 DIMIGEGPAARSIKIDLPPFTLVGATTRAGLLTSPLRDRFGIVQRLEFYNLKDLTHIVMR 195
           D++IGEGPAARS++IDLPPFTLVGATTR+GLLT+PLRDRFGI  RL+FY   +L  IV R
Sbjct: 138 DLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLDFYETDELVQIVTR 197

Query: 196 SARILDLPIEEKGALEIARRSRGTPRIANRLLRRVRDYAEIKSDGVITQNISDRALDMLD 255
            +R+L + + ++GA E+ARRSRGTPR+A RLLRRVRD+A +     +   I+D AL+ L+
Sbjct: 198 GSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPVDAFIADAALNRLE 257

Query: 256 VDHKGFDMMDRKLLLTIIEKFAGGPVGLDTLAAAIGEERDTIDEVLEPFLIQQGFIQRTP 315
           VD +G D MDR+ L  + + + GGPVG+DTLAAA+ EERDT+++V+EP+LIQQGFI+RTP
Sbjct: 258 VDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIEPYLIQQGFIKRTP 317

Query: 316 RGRIATKLAYQHF------EIIPQDPDLF 338
           RGR+ T +A+ H       E  P  PDL+
Sbjct: 318 RGRMLTAIAWTHLGLTPPAETPPVQPDLW 346