Pairwise Alignments

Query, 339 a.a., Holliday junction DNA helicase subunit RuvB from Kangiella aquimarina DSM 16071

Subject, 334 a.a., Holliday junction DNA helicase RuvB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  494 bits (1273), Expect = e-144
 Identities = 248/331 (74%), Positives = 286/331 (86%)

Query: 1   MIEHDRIITPSEFADEDQFDRAIRPTTLDEYVGQEKVREQMEIFLGAAKKRQEALDHVLI 60
           MIE DR+I P     +D  DRA+RP  LDEY GQ+  R Q+++F+ AAK R+EALDH+LI
Sbjct: 1   MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLI 60

Query: 61  FGPPGLGKTTLSNIIANEMGVGIKHTSGPVLEKAGDLAAMLTNLEPNDVLFIDEIHRLSP 120
           +GPPGLGKTTL+ I+ANEMGV IK TSGPVLEKAGDLAA+LTNLE  DVLFIDEIHRLSP
Sbjct: 61  YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSP 120

Query: 121 HVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGLLTSPLRDRFGIVQR 180
            VEE+LYPAMEDYQLDIMIGEGPAARSIK+DLPPFTLVGATTRAG LTSPLR RFGI  R
Sbjct: 121 VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR 180

Query: 181 LEFYNLKDLTHIVMRSARILDLPIEEKGALEIARRSRGTPRIANRLLRRVRDYAEIKSDG 240
           LEFYN+KDL+ IV RSA+++ L I+ +GA EIA+RSRGTPRIANRLLRRVRDYAE++ DG
Sbjct: 181 LEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVQHDG 240

Query: 241 VITQNISDRALDMLDVDHKGFDMMDRKLLLTIIEKFAGGPVGLDTLAAAIGEERDTIDEV 300
            +TQN+++ AL++LDVD +GFD MDRKLLL II+KF GGPVGLD LAAAIGEER+TI++V
Sbjct: 241 AVTQNVAELALNLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV 300

Query: 301 LEPFLIQQGFIQRTPRGRIATKLAYQHFEII 331
           LEPFLIQQGFIQRTPRGRIAT  AY HF +I
Sbjct: 301 LEPFLIQQGFIQRTPRGRIATARAYVHFGMI 331