Pairwise Alignments

Query, 176 a.a., Holliday junction endonuclease RuvC (EC 3.1.22.4) from Kangiella aquimarina DSM 16071

Subject, 197 a.a., Holliday junction resolvase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  115 bits (289), Expect = 3e-31
 Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 6/154 (3%)

Query: 4   ILGIDPGSRLTGFGII-EVGGQIPANRPRYITSGCIRIKDETLDLKLKQIFDSVCELIQE 62
           ++GIDPGS+ TG+G++ E+ G +       +  G IR K +    +L  +F  +  L+  
Sbjct: 38  VIGIDPGSQCTGWGVVREMSGVLTL-----VDCGAIRPKGDDFAARLGHLFRELHALVGR 92

Query: 63  FKPDEFAIESVFLSKNADSALKLGQARGAAIVAASHYALPVSEYPARKVKQSVVGTGGAD 122
           + PDE AIE+V  ++N  +ALKLGQARG A+ A + + + V++Y   ++K+++VGTGGAD
Sbjct: 93  YAPDEAAIENVHAARNVATALKLGQARGVAVAACAAHGVVVADYQPTEIKKALVGTGGAD 152

Query: 123 KTQVQHMVKTLLKLPTSPQADAADALAVALCHAN 156
           K QV  MV  +L        D  DALA A+CH N
Sbjct: 153 KEQVSFMVARVLGAKGGWGLDTGDALAAAVCHLN 186