Pairwise Alignments

Query, 176 a.a., Holliday junction endonuclease RuvC (EC 3.1.22.4) from Kangiella aquimarina DSM 16071

Subject, 166 a.a., crossover junction endodeoxyribonuclease RuvC (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  110 bits (274), Expect = 2e-29
 Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 7/165 (4%)

Query: 4   ILGIDPGSRLTGFGII-EVGGQIPANRPRYITSGCIRIKDETLDLKLKQIFDSVCELIQE 62
           ++GIDPGS+ TG+GI+ E  G +       +  G IR K      +L  ++  + ++++ 
Sbjct: 7   VIGIDPGSQCTGWGIVREASGVLTL-----VDCGAIRPKGGDFAARLGDLYRQLADVVRA 61

Query: 63  FKPDEFAIESVFLSKNADSALKLGQARGAAIVAASHYALPVSEYPARKVKQSVVGTGGAD 122
             PDE A+E V  ++N  +ALKLGQARG  + A + + +PV +Y    +K+++VGTG A+
Sbjct: 62  HTPDEAAVEDVHAAQNVATALKLGQARGVVVAACAAHGVPVIDYRPSVIKKALVGTGRAE 121

Query: 123 KTQVQHMVKTLLKLPTSPQADAADALAVALCHANTTQGLAQLKGV 167
           K QV +MV  +L +    + D  DALA A+CH N  + L +L G+
Sbjct: 122 KEQVGYMVGQVLGVRPDWKLDTGDALAAAICHLNQRR-LTRLAGL 165