Pairwise Alignments

Query, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

Subject, 382 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  469 bits (1206), Expect = e-137
 Identities = 233/375 (62%), Positives = 285/375 (76%), Gaps = 3/375 (0%)

Query: 2   SETLALSKDLINRPSVTPEDAGCQQMMMQYLEALGFKNEIMNFEDTSNFWSLRHGRTEGP 61
           S+ + L+++LI+RPSVTP D GCQ +M + L A+GF  E M FEDT+N W+ R   TEGP
Sbjct: 8   SDVIELTRELISRPSVTPLDEGCQDLMAKRLAAIGFTIEPMVFEDTTNLWARRG--TEGP 65

Query: 62  VFVFAGHTDVVPAGPLENWHTPPFEATEKEGYLYGRGASDMKSSLAAMLVATKRFVKDYP 121
           VF FAGHTDVVP G L  WHTPPF+    +GY++GRGA+DMK SLAAM+VA +RFV ++P
Sbjct: 66  VFCFAGHTDVVPVGDLNRWHTPPFDPVVIDGYIHGRGAADMKGSLAAMVVAAERFVAEHP 125

Query: 122 EHIGSIGFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSSSEQFGDVIKNGRRG 181
           +H GSI FLITSDEEGPFINGTVRVVE L  R++ + + +VGEPSS+   GDV+KNGRRG
Sbjct: 126 DHQGSIAFLITSDEEGPFINGTVRVVETLEARHEKITWALVGEPSSTHLLGDVVKNGRRG 185

Query: 182 SLTGFLTIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQFFPATSFQIAIIKAG 241
           SLTG LT+KG QGHVAYPHLADN IH++  AL EL+  EWD+GN+FFP TSFQIA I  G
Sbjct: 186 SLTGNLTVKGIQGHVAYPHLADNPIHRAAPALAELSRIEWDKGNEFFPPTSFQIANINGG 245

Query: 242 T-AGNVIPGEKYVEFNFRYSTETTHQELQQKVVAVLDKYNLEYDLNWKLNGEPFLTDHGH 300
           T A NVIPGE  V FNFRYSTE T + L  +V+ +LD + L+YD++W  NG PFLT  G 
Sbjct: 246 TGASNVIPGELKVMFNFRYSTEVTAETLIARVLGILDAHGLDYDIDWVFNGLPFLTGEGP 305

Query: 301 LLTAARNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIGPVNKTIHQINECVKIEDL 360
           LL A R AI  V   +T P TTGGTSDGRFIA TGA+++E+GPVN TIH++NECVK  DL
Sbjct: 306 LLDATREAIFEVTGTHTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKASDL 365

Query: 361 DKLTEVYYQILVELL 375
           + LT  Y +IL +LL
Sbjct: 366 ELLTGCYQRILEKLL 380