Pairwise Alignments

Query, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

Subject, 381 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella sp. ANA-3

 Score =  462 bits (1189), Expect = e-135
 Identities = 233/370 (62%), Positives = 279/370 (75%), Gaps = 3/370 (0%)

Query: 7   LSKDLINRPSVTPEDAGCQQMMMQYLEALGFKNEIMNFEDTSNFWSLRHGRTEGPVFVFA 66
           L+K+LI RPSVTP D GCQ +M + L A+GF  E M FEDT+N W+ R    EGPVF FA
Sbjct: 13  LTKELIARPSVTPLDEGCQTLMAERLAAIGFNIEPMVFEDTTNMWARRGN--EGPVFCFA 70

Query: 67  GHTDVVPAGPLENWHTPPFEATEKEGYLYGRGASDMKSSLAAMLVATKRFVKDYPEHIGS 126
           GHTDVVPAG L  WHTPPFE T  +GYLYGRGA+DMK SLAAM+VAT+RFV  +P H GS
Sbjct: 71  GHTDVVPAGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMIVATERFVAKHPNHPGS 130

Query: 127 IGFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSSSEQFGDVIKNGRRGSLTGF 186
           I FLITSDEEGPFINGT RV++ L  RN+ + + +VGEPSS+ + GDV+KNGRRGSLT  
Sbjct: 131 IAFLITSDEEGPFINGTTRVIDTLEARNEKITWTLVGEPSSTLKLGDVVKNGRRGSLTAN 190

Query: 187 LTIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQFFPATSFQIAIIKAGT-AGN 245
           LT+KG QGHVAYPHLADN IHK+   L EL+ T WD GN+FFP TS QIA I  GT A N
Sbjct: 191 LTVKGIQGHVAYPHLADNPIHKAAPFLAELSQTHWDNGNEFFPPTSMQIANINGGTGASN 250

Query: 246 VIPGEKYVEFNFRYSTETTHQELQQKVVAVLDKYNLEYDLNWKLNGEPFLTDHGHLLTAA 305
           VIPG   V FNFRYSTE T + L ++V A+L  + L+YD++W  NG PFLT  G LL A 
Sbjct: 251 VIPGTLEVMFNFRYSTEVTAEILIERVEALLTAHELDYDISWTFNGLPFLTGEGPLLDAT 310

Query: 306 RNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIGPVNKTIHQINECVKIEDLDKLTE 365
           R+AIR +   +T P TTGGTSDGRFIA TGA+++E+GPVN TIH++NECVKI+DL++L  
Sbjct: 311 RHAIRQITGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATIHKVNECVKIDDLEQLAL 370

Query: 366 VYYQILVELL 375
            Y  IL +LL
Sbjct: 371 CYEVILEQLL 380