Pairwise Alignments

Query, 236 a.a., D-alanyl-D-alanine carboxypeptidase from Kangiella aquimarina DSM 16071

Subject, 252 a.a., D-alanyl-D-alanine carboxypeptidase-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  147 bits (371), Expect = 2e-40
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 3/207 (1%)

Query: 29  LGQKFQCHHEALVPIAKLIRRSEQDGIPIRIVSSYRSFEHQLAIWNKKYY-QEVTLNLRD 87
           L  +F+   +  +    +   + +DGI + I S+YR F+ QLAIWN K   + V L++ +
Sbjct: 47  LETRFKLESQTALAFQAMADSAAKDGIKLAICSAYRPFDRQLAIWNAKASGKRVVLDINE 106

Query: 88  GSTVNSQDLDGQERVNAILHYSALPGASRHHWGTDFDVFDASAIDMGHDVELTEQEFAKQ 147
              V+   L   E V+ IL +SALPGASRHHWGTD DVFDA  I++   + L E E+   
Sbjct: 107 -QPVDITPLSESELVDLILLWSALPGASRHHWGTDIDVFDAEKIEV-KSLRLVEAEYRDG 164

Query: 148 GPCASLNDWLEDHLSEYQFFKPYAQDIGGVACEPWHISYQPIADKALKEFPLELLRQTLE 207
           GPCA L+ WL  +  ++ F+ P+ +    V+ EPWHISY P++   L +F ++ L Q + 
Sbjct: 165 GPCAQLHQWLVANAKDFGFYFPFQRGQSAVSAEPWHISYFPVSQILLPQFEVQALTQIIA 224

Query: 208 QSDLGGKQFIMPKLDALVHKYVMNICK 234
            SD+  K  ++ +L  LV +YV  I +
Sbjct: 225 HSDMLLKDAVLARLPELVAEYVHRIAQ 251