Pairwise Alignments

Query, 514 a.a., FOG: LysM repeat from Kangiella aquimarina DSM 16071

Subject, 566 a.a., membrane-bound lytic murein transglycosylase D precursor from Marinobacter adhaerens HP15

 Score =  330 bits (847), Expect = 6e-95
 Identities = 188/520 (36%), Positives = 285/520 (54%), Gaps = 22/520 (4%)

Query: 11  GLTACSTLVKQEDTVNDPRFDNPQTTE--DGSPLPAPELDNNNPLLLSDSEVAPFVPNLW 68
           GL       +  D   D   D     E  D +     +LDN    +   +E      +LW
Sbjct: 44  GLKKAVETGENRDAARDEPLDEAIAPELKDAARDAREKLDNP---VQKTAEAEAVEQDLW 100

Query: 69  EHLASEQSFAN-VQHPRIDAFREQYLKSPHLLLKRADKAAPYLYYIITELENRNMPVELA 127
             L S     + + + R+      Y + P  + +  ++ + YL+YI+ E E R +P E A
Sbjct: 101 ARLRSGFVLDHDIDNERVRDQLNWYARHPGYIDRVVERGSRYLHYIVNETEKRGLPAEYA 160

Query: 128 FTPMVESNFDPLAHSVVQAAGMWQFMPKTAKGFGITIDEWYDGRRDIVASTHAALDYYQY 187
             P+VES FDP A+S  +AAG+WQF+P T K FG+T   W+D RRD++A+T AAL Y + 
Sbjct: 161 LLPVVESAFDPFAYSHGRAAGLWQFIPSTGKYFGLTQSWWHDDRRDVIAATDAALTYLER 220

Query: 188 LNKMFDGDWLLTVAAYNVGPGNVMKAIRANKRQGKPTDYWSLKLPKETMRHIPKWLALSD 247
           L   FDGD  L +AAYN G G V  A+R N+   KPTD+WSL LP+ET  ++PK +AL+ 
Sbjct: 221 LANRFDGDHTLALAAYNSGGGTVSSAMRRNRNANKPTDFWSLHLPRETRHYVPKLIALAK 280

Query: 248 IFLNAPKYQVDLPLIDNQPAFVEVEVDAPANLMELAKIAQIDKDTFYRLNPAYNRLFVPE 307
           IF +   Y ++LP + ++P F  V+  +  +L + A++A +D D  Y LNP+YNR +   
Sbjct: 281 IFDDPEAYGIELPSLKDEPYFEVVDTGSQLDLAQAAELAGVDVDEIYLLNPSYNR-WATS 339

Query: 308 HHKKATILVPVETVDHFNQGLLEIDPKQLMASVSYKVKSGDNLSLIAKRHNTSVKTIKQL 367
                 +LVPV   + F   L EI   Q ++  +YKVKSGD+L+ I+++ +T+   ++Q+
Sbjct: 340 PDGPHRLLVPVGNAETFRAALAEIPANQRVSWRNYKVKSGDSLNSISRKFSTTPSVLQQV 399

Query: 368 NGLKSDFLKIGQELKMPGIINATE-YEKNFFATLSKNQQRRR---YQVYNVRSGDSLWTI 423
           N L SD ++IGQ L +P     ++ Y  +    L + Q+R+R      Y VR GD+ W I
Sbjct: 400 NNLDSDLIRIGQRLMIPSASKGSDAYALSASQRLERKQERKRDGNKVRYTVRKGDTFWDI 459

Query: 424 AKKFGVSTRQLANWNGIAQNSTIRIGQKLKVWPR-----------GYANYASNKSSYQVK 472
           A++  VS R++A WNG+A    +  G++L +W +           G       K  Y+V+
Sbjct: 460 AREHRVSVREVAAWNGMAPGDPLIPGKELVIWSKTSQPTVVAANSGRGKAMVRKVGYRVR 519

Query: 473 SGDSLYTIARRFNVKVSDLTKWNGLKNASLIKPGQTLTIY 512
            GDSL  IA RF+V V D+  WN L  A  ++PGQ+L +Y
Sbjct: 520 KGDSLARIASRFSVNVRDIASWNDLNTARYLQPGQSLVLY 559



 Score = 65.1 bits (157), Expect = 7e-15
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 19/128 (14%)

Query: 405 QRRRYQVYNVRSGDSLWTIAKKFGVSTRQLANWNGIAQNSTIRIGQKLKV-----WPRGY 459
           QR  ++ Y V+SGDSL +I++KF  +   L   N +  +  IRIGQ+L +         Y
Sbjct: 367 QRVSWRNYKVKSGDSLNSISRKFSTTPSVLQQVNNL-DSDLIRIGQRLMIPSASKGSDAY 425

Query: 460 ANYAS-------------NKSSYQVKSGDSLYTIARRFNVKVSDLTKWNGLKNASLIKPG 506
           A  AS             NK  Y V+ GD+ + IAR   V V ++  WNG+     + PG
Sbjct: 426 ALSASQRLERKQERKRDGNKVRYTVRKGDTFWDIAREHRVSVREVAAWNGMAPGDPLIPG 485

Query: 507 QTLTIYSK 514
           + L I+SK
Sbjct: 486 KELVIWSK 493