Pairwise Alignments

Query, 514 a.a., FOG: LysM repeat from Kangiella aquimarina DSM 16071

Subject, 587 a.a., transglycosylase, SLT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  174 bits (442), Expect = 6e-48
 Identities = 141/475 (29%), Positives = 220/475 (46%), Gaps = 37/475 (7%)

Query: 3   RLLLISCLGLTACSTLVKQEDTVNDPRFDNPQTTEDGSPLPA--------------PELD 48
           R LL+  L L A S  V    T   P    P   E   P P               P +D
Sbjct: 14  RRLLLMMLALVALSISVSGCAT-RKPLSSLPADKETACPAPEKSSGSSDEVVELAIPPVD 72

Query: 49  NNNPLLLSDSEVAPFVPNLWEHLASEQSFANVQHPRIDAFREQYLKSPHLLLKRADKAAP 108
           +  PL  ++         +  +L+ E   A V H     F+    ++   + + A ++  
Sbjct: 73  DGLPLSPAEQAALASTGEVDRNLSPEDYRAVVLH-----FKYYTHRARGTMERLARRSQN 127

Query: 109 YLYYIITELENRNMPVELAFTPMVESNFDPLAHSVVQAAGMWQFMPKTAKGFGITIDEWY 168
           YL Y+   L  R +P ELA+  +VES ++P A S   A G+WQFMP T K +G+  D W 
Sbjct: 128 YLPYVREVLRKRGLPEELAYLAIVESGYNPNAVSSSGAVGIWQFMPYTGKLYGLDYDWWI 187

Query: 169 DGRRDIVASTHAALDYYQYLNKMFDGDWLLTVAAYNVGPGNVMKAIRANKRQG------- 221
           D RRD   +TH+A  Y   L   F+ DW L +AAYN G G + +A+     +G       
Sbjct: 188 DERRDPYKATHSAASYLAKLYGDFN-DWHLALAAYNAGEGKIGRALAGTGAKGFFELVRR 246

Query: 222 KPTDYWSLKLPKETMRHIPKWLALSDIFLNAPKYQVDLPLIDNQPAF--VEVEVDAPANL 279
             +     +L  ET +++P+++A++ I  N     +    +D   A   VEV V    +L
Sbjct: 247 NESLDEKARLKDETKQYVPRFIAITKIMRNL--QSLGFAPLDTSCAIRPVEVRVRPGTDL 304

Query: 280 MELAKIAQIDKDTFYRLNPAYNRLFVPEHHKKATILVPVETVDHFNQGLLEIDPKQLMAS 339
           M LA+ + +   +F  LNPA+ R +V      + I +P    +     L +   +     
Sbjct: 305 MALAQASGMSWASFSDLNPAFRR-YVSPPDAHSVIYLPEARREAALAYLAKPQTRNYAGW 363

Query: 340 VSYKVKSGDNLSLIAKRHNTSVKTIKQLNGLKSDFLKIGQELKMPGIINATEYEKNFFAT 399
             Y V+ GD L  + KR    V  +KQ+N ++S+ LK+G  L +PG    T +E +    
Sbjct: 364 QPYTVRKGDTLERVGKRAGVPVSVLKQVNKVRSNNLKVGSTLLIPG---GTHHEPDTGPA 420

Query: 400 LSKNQQRRRYQVYNVRSGDSLWTIAKKFGVSTRQLANWNGIAQNSTIRIGQKLKV 454
           + +    RR   Y V+ GD+L++IA+  GV    L   NG+A+  T+R+GQKL +
Sbjct: 421 IKRALAERRGS-YIVKQGDTLYSIARTQGVELNTLMQANGMAEAHTLRVGQKLYI 474



 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 327 GLLEIDPKQLMASVSYKVKSGDNLSLIAKRHNTSVKTIKQLNGLKSDFLKIGQELKMPGI 386
           G   +D    +  V  +V+ G +L  +A+    S  +   LN     F +         +
Sbjct: 281 GFAPLDTSCAIRPVEVRVRPGTDLMALAQASGMSWASFSDLNPA---FRRYVSPPDAHSV 337

Query: 387 INATEYEKNFFATLSKNQQRRRY---QVYNVRSGDSLWTIAKKFGVSTRQLANWNGIAQN 443
           I   E  +          Q R Y   Q Y VR GD+L  + K+ GV    L   N +  N
Sbjct: 338 IYLPEARREAALAYLAKPQTRNYAGWQPYTVRKGDTLERVGKRAGVPVSVLKQVNKVRSN 397

Query: 444 STIRIGQKLKVWPRGYAN-----------YASNKSSYQVKSGDSLYTIARRFNVKVSDLT 492
           + +++G  L + P G  +            A  + SY VK GD+LY+IAR   V+++ L 
Sbjct: 398 N-LKVGSTLLI-PGGTHHEPDTGPAIKRALAERRGSYIVKQGDTLYSIARTQGVELNTLM 455

Query: 493 KWNGLKNASLIKPGQTLTI 511
           + NG+  A  ++ GQ L I
Sbjct: 456 QANGMAEAHTLRVGQKLYI 474



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 339 SVSYKVKSGDNLSLIAKRHNTSVKTIKQLNGLKSD 373
           +V+YKV+ GD +  IA++ N   K + + N L+ D
Sbjct: 539 TVTYKVQQGDTMWAIARKFNVHPKELMRQNRLEMD 573