Pairwise Alignments

Query, 393 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

Subject, 325 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score = 94.0 bits (232), Expect = 6e-24
 Identities = 88/337 (26%), Positives = 151/337 (44%), Gaps = 22/337 (6%)

Query: 52  IQVSKVSISPALFGIGTVEARYQYKVGPTIPGRVQTLKVDIGDQVTKGQLLGVMDSVDLE 111
           +QVS+   + AL   G ++AR++  +G  + G+V    VD+G  VT GQLL  +D+ D  
Sbjct: 1   VQVSQFDRTAAL--TGEIQARHESNLGFRVSGKVIERLVDVGQTVTSGQLLARLDNQD-- 56

Query: 112 QRMEAQQSALMQAKAKLQEAQTRYQFSDEQFKRYQKLLESNSISEEQFLVKQQDYHIAEA 171
                Q +A+  A++ +  AQ   + S  Q +R + LL +   +  Q+   Q+ +  A+A
Sbjct: 57  -----QTNAVRSAESDVAAAQAAVEQSRTQEERQRSLLANGFTTRVQYDNAQKRFQQAQA 111

Query: 172 GLAAARQELLRQEAEQKAMQAQQHNLDLISPIDGIVVKRNAEQGTTVVAGQSVIEIINP- 230
            L +A       EA+  + +      +L +  DG++  + AE G  V  GQ V+ + +P 
Sbjct: 112 ELNSA-------EAQLGSARDTLSYTELRADRDGVITAKAAEPGQVVAVGQPVLRLADPN 164

Query: 231 -EDIWINVRFDQIHSTGLNPGLTALVNLRSKSKLDLSGKIYRVEPIADAVTEEFLAKVTI 289
             +    V    I   G        V L + +K    G I  V P  D VT  +  KV++
Sbjct: 165 EREAVFQVPGASIRLEGREGLPPVEVRLVNDAKTVTEGTIREVSPGVDPVTRTYTVKVSL 224

Query: 290 DELPQPLPSIGELAEVTIELDSLPSTTVIPNAALKRIDGELGVWKII--DGDIEYVPVSI 347
              P     +G       +L + P   +  +A  +  +GE  VW +      +   PVS+
Sbjct: 225 PNAPDAF-LLGSSVVGRAKLPTRPVVNLPSSALFQTGNGEPAVWVVARPADTVSLRPVSV 283

Query: 348 GATDLDGLVEIKKGLSLGESVVLHSEKALTANSRIKV 384
              D  G V +  GLS G+ VV+   + L  + ++ +
Sbjct: 284 LQYD-TGTVTVSSGLSDGDLVVVGGVQKLRPDQKVTI 319