Pairwise Alignments

Query, 393 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

Subject, 427 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

 Score =  107 bits (266), Expect = 8e-28
 Identities = 96/377 (25%), Positives = 166/377 (44%), Gaps = 44/377 (11%)

Query: 47  TLVTQIQVSKVSISPALFGIGTVEARYQYKVGPTIPGRVQTLKVDIGDQVTKGQLLGVMD 106
           T V    V +  +  A    GT E      +   + G+V  L VD+GD V  GQLL  +D
Sbjct: 45  TAVDAAVVERQPLQEATRYTGTTEPFQSVSLRAQVEGQVLGLSVDVGDPVQSGQLLARLD 104

Query: 107 S--------------VDLEQRMEAQQSALMQAKAKLQEAQTRYQFSDEQFKRYQKLLESN 152
                             +  + +Q++ ++ A A +++A+ + Q +     R  +L ++ 
Sbjct: 105 DRLQSTAVVAAAAEVAARQSEVASQRAEVIAAMASVEQARLQLQQARSDAARLTRLFQAG 164

Query: 153 SIS--------------EEQFLVKQQDYHIAEAGLAAARQELLRQEAEQKAMQAQQHNLD 198
           +IS              E+     QQ     +  +AAA + ++ Q+A     QA+++   
Sbjct: 165 AISAQEAETAQTAVLTAEQAVRTAQQQVQTRQQAVAAAERRVVAQQAIANQEQARRNFTQ 224

Query: 199 LISPIDGIVVKRNAEQGTTVVAGQSVIEIINPEDIWINVRFDQIHSTGLNPGLTALVNLR 258
           LI+P+ G+V++R+ E G     G  ++ I +   I + +R  ++    L  G +  V L 
Sbjct: 225 LIAPVTGLVLERSTEAGNLAREGDEILTIGDFSRIKVVLRVSELELANLRVGQSVQVRLD 284

Query: 259 SKSKLDLSGKIYRVEPIADAVTEEFLAKVTIDELPQPLPSIGE--LAEVTIELDSLPSTT 316
           +  K   +G+I R+ P+AD  T     ++T   +P P   IG   LA V +   S P   
Sbjct: 285 AFPKQTFTGQISRIAPVADRRTRLIPVEIT---MPNPDGRIGSGLLARVVLS-SSAPDPI 340

Query: 317 VIPNAALKR----IDGELGVWKII--DGD---IEYVPVSIGATDLDGLVEIKKGLSLGES 367
           V+P AAL         + G   ++   GD    E   V +G    DG V I+ GL  GE+
Sbjct: 341 VVPEAALSTGETPTTSDRGTVFVVKKQGDRTTTEARSVRLGPR-ADGRVVIQSGLQAGET 399

Query: 368 VVLHSEKALTANSRIKV 384
           +V+ S   L A  ++++
Sbjct: 400 IVVRSASPLKAGQQVRL 416