Pairwise Alignments

Query, 269 a.a., DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) from Kangiella aquimarina DSM 16071

Subject, 280 a.a., 5-hydroxymethyluracil DNA glycosylase from Azospirillum brasilense Sp245

 Score =  193 bits (490), Expect = 4e-54
 Identities = 119/281 (42%), Positives = 160/281 (56%), Gaps = 13/281 (4%)

Query: 1   MPELPEVETTKNGLAPHIVGKPIKAVNIYQPQLRWPIAVE-AKALVGITSGEIRRRAKYM 59
           MPELPEVET   GLAPH+ G+ +  V   +  LR P      + L G     +RRRAKY+
Sbjct: 1   MPELPEVETVCRGLAPHLEGRTLVQVLQRRANLRVPFPDGFCERLTGRRVESVRRRAKYI 60

Query: 60  LWEFPSGS-LVMHLGMSGTMRVVSAQTAL-KKHDHFEVVFEDGSALRFNDPRRFGAILWQ 117
           L     G+ L+ HLGMSG M +   + A    HDH  +  + G+ + FND RRFG ++  
Sbjct: 61  LVHLDDGTVLIAHLGMSGRMIITPERPAAWGAHDHVVLETDAGTVVTFNDARRFG-LMDL 119

Query: 118 PAGETLS---VLSQLGPEPLSDDFDGKYLHTALSKRKGAIKNAIMDNKVVVGVGNIYASE 174
              ETL+   +L  LGPEPL + F G  L   L+ R  +IK A++D  VV G+GNIY SE
Sbjct: 120 AMAETLAEHPLLRALGPEPLGNAFSGPVLAARLAGRMTSIKAALLDQSVVAGLGNIYVSE 179

Query: 175 SLFMSGIHPKRAANKVSLARCNLLAGFIKAVLEKAIGEGGTTLKDFTQTDGSPGYFAQQL 234
           +LF++ + P R A  VS A+   LA  I+AVLE+AI  GG++L+D+ Q  G  GYF  Q 
Sbjct: 180 ALFLARLSPTRIAATVSGAKAERLAAAIRAVLERAIAAGGSSLRDYRQASGELGYFQHQF 239

Query: 235 NVYGRADLPCNQCGSLIKKQ------IIGQRSSFYCPKCQR 269
           +VY R   PC  C   + K       +   RS+FYCP+ QR
Sbjct: 240 SVYDREGAPCPGCSCDVAKTGGVRRIVQAGRSTFYCPQRQR 280