Pairwise Alignments

Query, 269 a.a., DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) from Kangiella aquimarina DSM 16071

Subject, 282 a.a., DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase from Synechococcus elongatus PCC 7942

 Score =  175 bits (444), Expect = 8e-49
 Identities = 106/282 (37%), Positives = 148/282 (52%), Gaps = 17/282 (6%)

Query: 1   MPELPEVETTKNGLAPHIVGKPIKAVNIYQPQLRWPIAVEAKAL--VGITSGEI---RRR 55
           +PELPEVET + GL    + +      +    L   IA     L  V +   +I   RRR
Sbjct: 1   LPELPEVETVRRGLTQQTLQRVCTGGEVL---LSRTIATPTPELFLVALQQTQIQEWRRR 57

Query: 56  AKYMLWEF-----PSGSLVMHLGMSGTMRVVSAQTALKKHDHFEVVFEDGSALRFNDPRR 110
            KY+L +      P+G+  +HL M+G        T L KH    + FE    LRF D R 
Sbjct: 58  GKYLLADLSREGEPAGTWGVHLRMTGQFFWTEPATPLTKHTRVRLRFEGDRELRFIDIRS 117

Query: 111 FGAILW----QPAGETLSVLSQLGPEPLSDDFDGKYLHTALSKRKGAIKNAIMDNKVVVG 166
           FG + W    +P    ++ LS+LGPEP + +F  +YL   L + +  IK A++D  +V G
Sbjct: 118 FGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLRRSQRPIKTALLDQSLVAG 177

Query: 167 VGNIYASESLFMSGIHPKRAANKVSLARCNLLAGFIKAVLEKAIGEGGTTLKDFTQTDGS 226
           +GNIYA ESLF +GIHP   +++++  +   L   I  VL  +IG GGTT  DF    G 
Sbjct: 178 IGNIYADESLFRTGIHPTTPSDRLTKIQAEKLREAIVEVLTASIGAGGTTFSDFRDLTGV 237

Query: 227 PGYFAQQLNVYGRADLPCNQCGSLIKKQIIGQRSSFYCPKCQ 268
            G +  Q  VYGR D PC  CG+ I+K  +  RSS +CP+CQ
Sbjct: 238 NGNYGGQAWVYGRKDQPCRTCGTPIQKLKLAGRSSHFCPRCQ 279