Pairwise Alignments

Query, 730 a.a., replication restart DNA helicase PriA from Kangiella aquimarina DSM 16071

Subject, 727 a.a., primosomal protein N' (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  392 bits (1006), Expect = e-113
 Identities = 263/736 (35%), Positives = 382/736 (51%), Gaps = 28/736 (3%)

Query: 7   ILKVAVPTPLRRSFDYLVGQHATPPIGSRVRVSFGRQQLVGIVVAHTEISSTPQNKLKAI 66
           ++ V    PL R+ DY   +      G  V V  G +++VG+V    +    P  KL+ +
Sbjct: 8   LVAVLTTQPLDRTLDYKAPEGGCVQ-GDFVEVPLGPRKVVGVVWGPGQGDWDPA-KLRRV 65

Query: 67  LEVIDSEPLLPNHLFKLLLWAADYYMHPIGDVFTTCLPSLLNKGE--PAQLEPEYCWKLT 124
           L V+D+ P+  + +   L  AA Y + P        +P++L      P   +     K+ 
Sbjct: 66  LRVLDTPPMR-DEMRAFLTRAARYTLTP--------MPAMLRLATRAPGLGDAPSMRKVL 116

Query: 125 ADGQSAFPDLNKNAVKQHKILLWAIDHQGTIQASDLEQLELTPSQLKPLVEKGWLQKEVI 184
             G+   P     A  +    L A       QA  +E   ++ S +K LV  G + ++  
Sbjct: 117 VAGEGE-PARMTEARMRVMDALAAYGGAPVTQAELVEAAGVSASVIKGLVAAGAIHEQDT 175

Query: 185 K---PTPTSHGQTSNSLDLNPEQRHAVESMQKSIGQ--FQGFLLDGVTGSGKTEVYLQLI 239
               P P           L PEQ  A   +   I    +   LL GVTGSGKTEVYL+ +
Sbjct: 176 PRDLPYPPLDPARPGK-PLTPEQEAAAGHLLHGIEAEAYGTTLLKGVTGSGKTEVYLEAV 234

Query: 240 EKVLTNQQQVLVLVPEIGLTPQTVQRFKRRFDCDIAMLHSGLTDRQRLNIWLKAKQGLTS 299
              L   +Q LVL+PEI L+ + + R + RF    A  HSG+T  +R   W    +G   
Sbjct: 235 AACLAKGRQALVLLPEIALSAEFLTRVEARFGARPAEWHSGVTMTERRRCWRMVAEGGAR 294

Query: 300 IVIGTRSSLFTPFANLGLIVVDEEHDVSYKQQEGFRYSARDLAILRARDEQTPVVLGSAT 359
            V+G RS+LF PF +LGLIVVDEEHD SYKQ+EG  Y+ARD+A+LRA      VVL SAT
Sbjct: 295 FVVGARSALFLPFQDLGLIVVDEEHDTSYKQEEGVLYNARDMAVLRASLASAQVVLASAT 354

Query: 360 PSMESMYNVNQGKLVHLTLRKRAANAKPPHIKVLDIRQRHLNNG--LSQPLLDNMQRHLD 417
           PS+ES  N   GK + + L  R   A+ P +  +D+R   +  G  LS  L   +   L+
Sbjct: 355 PSLESWANAEAGKYLRVDLGARFGAAELPEMAAIDMRAEEVPFGRWLSPSLKRAVTARLE 414

Query: 418 NGNQCLVFLNRRGFAPSLMCHGCGWIADCQRCDKHMTLHLQQKRLHCHHCDKQVFMPKQC 477
            G Q L+FLNRRG+AP  +C  CG    C+ CD  M  H  QKRL CH C     +P+ C
Sbjct: 415 AGEQSLLFLNRRGYAPVTLCRACGHQIGCETCDARMVEHRFQKRLMCHQCGATRAIPEAC 474

Query: 478 PECGAE-DLFPVGLGTERLEQALINAFPNKKVVRIDRDSTRRKQAMQDYVTAIKNNEVDI 536
           P C AE  L  VG G ERL +    AFP+ ++  +  D     +A++  +  I     DI
Sbjct: 475 PSCEAEGKLAAVGPGVERLAEEAAEAFPDARIAVLSSDLFGSARALKAQIVEIAEGAADI 534

Query: 537 LVGTQMLAKGHHFPNLTMVAVVDIDGCLFSADFRATERTAQLLTQVAGRAGRADQPGEVV 596
           ++GTQ++AKGH+FP LT+V V+D D  L  +D RA ERT QL+ QVAGRAGRA++ GE +
Sbjct: 535 IIGTQLVAKGHNFPLLTLVGVIDADLGLQGSDLRAAERTFQLMRQVAGRAGRAEKRGEAL 594

Query: 597 IQTHHPEHPLLLNLFTQDYQSLSQQILAEREAGMLPPYASMALFRAEATTLQYPMQFLKD 656
           +QT+ P+HP++  + T D ++  +    ER A  +PPY  MA     +  LQ        
Sbjct: 595 LQTYQPDHPVIRAILTGDEEAFWRAEAGERHAAGMPPYGRMAGIILSSPDLQEVFDLGNA 654

Query: 657 VSQSLHQIT--GLDCFGPFPAPMAKRAGKMRAQLLCQAQQRGLIQRALKPVISNIEQLPS 714
           ++++   ++  G   +GP PAP+A+  G+ R +LL  A +   +Q AL   +  ++  P+
Sbjct: 655 LARNHAPLSAVGATVYGPAPAPIARIRGRHRVRLLVTAPKGVALQDALARWVGQVKTGPN 714

Query: 715 ARKVRWSIDIDPQDPF 730
              +R ++DIDPQ  F
Sbjct: 715 ---LRLAVDIDPQSFF 727