Pairwise Alignments

Query, 369 a.a., Uncharacterized protein required for cytochrome oxidase assembly from Kangiella aquimarina DSM 16071

Subject, 330 a.a., cytochrome oxidase assembly protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  263 bits (672), Expect = 5e-75
 Identities = 144/341 (42%), Positives = 199/341 (58%), Gaps = 33/341 (9%)

Query: 15  ILALCVILLGAWTRLSDAGLGCPDWPGCYGHFTVPQDADYIKQAEVEY-NQVFEADKAWP 73
           +  L VIL+GA+TRLSDAGLGCPDWPGCYGH  VP     +  A+  + +   E +KAW 
Sbjct: 12  VFTLLVILMGAYTRLSDAGLGCPDWPGCYGHIKVPTQDHELSHAQSLFPDHDIEPEKAWL 71

Query: 74  EMIHRHFAKAIGLVIIILFVGAWKGRRKDPSIPVLLPSILLPLVIFQGLLGMWTVTLKVH 133
           EMIHR+ A  +GL+++ +    W    K P  P  LP  ++ L++FQG LGMWTVT+K+ 
Sbjct: 72  EMIHRYIAGGLGLLVLCI----WFLCLKTPDAPKKLPLFIVLLILFQGALGMWTVTMKLM 127

Query: 134 PFVVMLHLLGGFSILSLLFLYILQLRPKIVSLSQVVAKKFKKLAMVSLVLVILQIALGGW 193
           P VVM HLLGGFS++SLL L  L+ RP+ +  S    +    LA+VSL ++I QI LGGW
Sbjct: 128 PIVVMSHLLGGFSLISLLLLLYLRTRPRRIVASDTSVQNLAPLALVSLFVLIGQIMLGGW 187

Query: 194 TAANYAATACTELPFCNDGWTQNVDFKGGYDLWQKGFEFDEFKALEQEKFEADLAKAQGE 253
           T++NYAA ACT LP C   W  N+     +  +Q                          
Sbjct: 188 TSSNYAALACTALPICEGNWMDNLAIADAFSPFQGQHP---------------------- 225

Query: 254 PFINYEGGVLSHDQKVAIHVSHRIGAYIVFLIVGLLALLMIREKDSVLIRHFGRALALVL 313
              ++E GVL +  ++ IH++HRIGA I      LL LL  R   S  ++     L  +L
Sbjct: 226 ---SFEFGVLDYHARMTIHIAHRIGAIIT---ASLLLLLAYRLFVSTQLKALSLLLVGLL 279

Query: 314 IGQMLLGFSNIIFALPLYVAVAHNGGGAILLLTVLAVNFLV 354
           I Q+ LG SN++  LPL +AV+HNGG A+LLLT++ +N+ +
Sbjct: 280 ILQVSLGISNVVMHLPLGIAVSHNGGAALLLLTLVTINYFL 320



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 2/153 (1%)

Query: 4   KTLRKFAIFASILALCVILLGAWTRLSDAGLGCPDWPGCYGHFTVP-QDADYIKQAEVEY 62
           + L   A+ +  + +  I+LG WT  + A L C   P C G++      AD     + ++
Sbjct: 165 QNLAPLALVSLFVLIGQIMLGGWTSSNYAALACTALPICEGNWMDNLAIADAFSPFQGQH 224

Query: 63  NQVFEADKAWPEMIHRHFAKAIGLVIIILFVGAWKGRRKDPSIPVLLPSILLPLVIFQGL 122
                    +   +  H A  IG +I    +     R    +    L  +L+ L+I Q  
Sbjct: 225 PSFEFGVLDYHARMTIHIAHRIGAIITASLLLLLAYRLFVSTQLKALSLLLVGLLILQVS 284

Query: 123 LGMWTVTLKVHPFVVMLHLLGGFSILSLLFLYI 155
           LG+  V + + P  + +   GG ++L L  + I
Sbjct: 285 LGISNVVMHL-PLGIAVSHNGGAALLLLTLVTI 316