Pairwise Alignments

Query, 641 a.a., ATP-dependent metalloprotease FtsH from Kangiella aquimarina DSM 16071

Subject, 630 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  532 bits (1370), Expect = e-155
 Identities = 282/576 (48%), Positives = 389/576 (67%), Gaps = 10/576 (1%)

Query: 32  NSQVTFSEFVSRIEAKEVDDVVINPNNNLV----TGKDL-NTNSEINAEIPAGGHEKLND 86
           ++++T+  F+  ++A  V  V                DL N    +  ++P G    L  
Sbjct: 41  STRMTYGRFLEYLDAGRVTAVDFYEGGRTAIVEAVDPDLDNRLQRLRVDLP-GTSPDLIT 99

Query: 87  LLLANDINYS--GKKREGGGFGTFLLSFGPILLLIAVWIYFMRQMQGGGKGGGALSFGKS 144
            L  +DIN+     + +G  +G       PILL++ ++  F R     G  G A+ FGKS
Sbjct: 100 RLRDSDINFDVHPPRNDGAIWGLLSNLIFPILLIVGLFFLFRRSGNVPGGPGQAMQFGKS 159

Query: 145 KARMLSEDQVKTTFADVAGVEEAKEEVGELVDFLRDPRKFQRLGGKIPRGVLMVGPPGTG 204
           KAR   + +    F DVAG+EEAKEE+ E+V FL++  +F  +G +IP+GVL+VGPPGTG
Sbjct: 160 KARFQMDAKTGVLFDDVAGIEEAKEELQEVVTFLKNSERFTAVGARIPKGVLLVGPPGTG 219

Query: 205 KTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVG 264
           KTLLA+AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK++APCI+FIDEIDAVG
Sbjct: 220 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVG 279

Query: 265 RHRGAGLGGGHDEREQTLNQLLVEMDGFEGGEGVIVIAATNRPDVLDPALLRPGRFDRQV 324
           R RGAG+GGG+DEREQTLNQLL EMDGFEG  G+I+IAATNRPDVLD AL RPGRFDRQ+
Sbjct: 280 RQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDAALTRPGRFDRQI 339

Query: 325 VVGLPDIKGREQILKVHMRKVPIGDDVEPGVIARGTPGFSGADLANLVNEAALFAARDNQ 384
           +V  PDIKGR +ILKVH R   + +DV   VIAR TPGF+GADLANL+NEAA+  AR  +
Sbjct: 340 IVDAPDIKGRLEILKVHARNKKLAEDVSLDVIARRTPGFAGADLANLLNEAAILTARRRK 399

Query: 385 RIVGMEQFEKAKDKILMGTERRSMVMTEEEKLNTAYHEAGHAIVGLKVPSHDPVYKVSII 444
             + + + + A D+++ G E   +V  + ++L  AYHE GHAIVG  V  HDPV KV++I
Sbjct: 400 DAITLTEIDDAVDRVVAGMEGTPLVDGKSKRL-IAYHEVGHAIVGTLVKDHDPVQKVTLI 458

Query: 445 PRGRALGVTMYLPEQDKYSLSKEALESQLSSLFGGRIAEEILNGPDKVTTGASNDIERAT 504
           PRG+A G+T + P++++   S+  + +++    GGR AE+++ G D+VTTGA ND+++ T
Sbjct: 459 PRGQAQGLTWFAPDEEQGLTSRAQILARIKGALGGRAAEDVIFGHDEVTTGAGNDLQQVT 518

Query: 505 SLARNMVTKWGLSDKLGPLSYAEDEGEVFLGRSVTQHKNISDETARAIDAEIRDIIDRNY 564
            +AR MVT++G+SD LGPLS      EVFLGR +      S+  A  IDA++ DI+D  Y
Sbjct: 519 GMARQMVTRFGMSD-LGPLSLEGQSQEVFLGRDLMTRSEYSERIAIRIDAQVHDIVDHCY 577

Query: 565 NRAKTILQDNMDKLHAMADALMKYETIDANQIKQIM 600
                +++DN   +  + D L++ ETID ++ +QI+
Sbjct: 578 QETLQLIRDNRIVIDRLVDLLIEKETIDGDEFRQIV 613