Pairwise Alignments

Query, 641 a.a., ATP-dependent metalloprotease FtsH from Kangiella aquimarina DSM 16071

Subject, 613 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  582 bits (1500), Expect = e-170
 Identities = 300/608 (49%), Positives = 434/608 (71%), Gaps = 16/608 (2%)

Query: 6   KNILFWAVAAVILFIVIDAIQERQTDNSQVT--FSEFVSRIEAKEVDDVVINPNNN--LV 61
           KN   +A+ A+++  +  A+ +++   +  T  +SEFV R+E K+V  V+++P+ +  LV
Sbjct: 6   KNAGLYALLAIVVIALGTALLDQRGTETVATWRYSEFVQRVENKQVAKVILSPDRSSALV 65

Query: 62  TGKDLNTNSEINAEIPAGGHEKLNDLLLANDINYSGKKREGGGFGTFLLS--FGPILLLI 119
             +D     ++   +P     +L  +L  N+++ S + +         LS  F PILLL+
Sbjct: 66  QAED---GDKVQVNLP--NDPQLLKILTDNNVDISVRPQNQDSVWLRALSSLFFPILLLV 120

Query: 120 AVWIYFMRQMQGGGKGGGALSFGKSKARMLSEDQVKTTFADVAGVEEAKEEVGELVDFLR 179
              ++F+ +   GG G  A++FGKSKAR+  E Q + TF DVAG+++AK E+ E+VDFL+
Sbjct: 121 G--LFFILRRAQGGPGNQAMNFGKSKARVQMEPQTQVTFNDVAGIDQAKLELTEVVDFLK 178

Query: 180 DPRKFQRLGGKIPRGVLMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASR 239
           +  +F  +G +IP+GVL+VGPPGTGKTLLA+A+AGEA VPFF+ISGS+FVEMFVGVGASR
Sbjct: 179 NADRFTAVGAQIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASR 238

Query: 240 VRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGGEGVI 299
           VRD+FEQAK  APCI+FIDEIDAVGR RGAGLGGG+DEREQTLNQLL EMDGFEG  G+I
Sbjct: 239 VRDLFEQAKASAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGII 298

Query: 300 VIAATNRPDVLDPALLRPGRFDRQVVVGLPDIKGREQILKVHMRKVPIGDDVEPGVIARG 359
           ++AATNRPDVLD AL+RPGRFDRQVVV  PD  GR +IL+VH R   +  D++   IAR 
Sbjct: 299 IVAATNRPDVLDAALMRPGRFDRQVVVDRPDYNGRLEILRVHARGKSLSKDIDLDKIARR 358

Query: 360 TPGFSGADLANLVNEAALFAARDNQRIVGMEQFEKAKDKILMGTERRSMVMTEEEKLNTA 419
           TPGF+GADL+NL+NEAA+ AAR +   + M++   A D++L G E++  VM+E+ K+  A
Sbjct: 359 TPGFTGADLSNLLNEAAILAARRSLAEISMDEVNDAIDRVLAGPEKKDRVMSEKRKVLVA 418

Query: 420 YHEAGHAIVGLKVPSHDPVYKVSIIPRGRALGVTMYLPEQDKYS---LSKEALESQLSSL 476
           YHEAGHA+VG  +P +DPV K+SIIPRGRA G+T + P +++      S+  L++Q++  
Sbjct: 419 YHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEERMESGLYSRTYLQNQMAVA 478

Query: 477 FGGRIAEEILNGPDKVTTGASNDIERATSLARNMVTKWGLSDKLGPLSYAEDEGEVFLGR 536
            GGR+AEEI+ G ++VTTGASND+++   +AR MVT++G+SD+LGP++    +G +FLGR
Sbjct: 479 LGGRLAEEIVFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQQGNMFLGR 538

Query: 537 SVTQHKNISDETARAIDAEIRDIIDRNYNRAKTILQDNMDKLHAMADALMKYETIDANQI 596
            +   ++ S+ETA  ID E+R ++D  Y+RAK +L +N   L  +A  L++ ET+DA ++
Sbjct: 539 DIAAERDFSEETAATIDDEVRQLVDVAYDRAKKVLIENRSILDQLAKMLVEKETVDAEEL 598

Query: 597 KQIMDGDD 604
           + +++ ++
Sbjct: 599 QDLLNNNE 606