Pairwise Alignments

Query, 106 a.a., Beta-barrel assembly machine subunit BamE from Kangiella aquimarina DSM 16071

Subject, 163 a.a., small protein A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.0 bits (188), Expect = 9e-20
 Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 8/100 (8%)

Query: 6   LSALLLCFSLLSAC------VYKPTIQQGNILEQSEVNKIKPGMTKDQISYVLGNPALNT 59
           LSA+ L  SL SAC      +YKP I QGN +E  +V K++  MTK+Q  Y+LG P L  
Sbjct: 11  LSAIALSVSL-SACSVFDWLIYKPDIPQGNYMEPQQVEKLRIDMTKEQAEYILGRPVLRD 69

Query: 60  NLNSDTWYYLY-YMVPSSGEKREERLILHFNGDVLRSMEG 98
           +   DTWYY+Y Y          + LILHF G+ L  ++G
Sbjct: 70  SFADDTWYYVYHYKSGRDASITHKELILHFTGNKLSLVKG 109