Pairwise Alignments

Query, 230 a.a., rRNA methylases from Kangiella aquimarina DSM 16071

Subject, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 7/158 (4%)

Query: 15  LLSNRQPDLTVFMDEVHKPHNLAAIVRTADAVGIGHVHAVFPE----GVRYSGHHTSSGS 70
           LL+       + +D V  PHNL A +R ADA G+  +  + P+    G+       + G+
Sbjct: 90  LLAKTDLPFLLILDGVTDPHNLGACLRNADAAGVQGI--IVPKDNSVGLTAVVSKVACGA 147

Query: 71  KRWVTTHKHETLKSGIAEMKAQGMQVLAAHLSDKAVDFRSIDYTKPTCILVGSELVGVSD 130
              V   +   L   +  ++ +G+ ++     +   +    D   P  I +G+E  G+  
Sbjct: 148 AETVPLFQVTNLARTMRHLQEKGVWIVGT-AGEADCELYQADLKGPLAIAMGAEGKGLRR 206

Query: 131 EAADLADEHVIIPMVGMVQSLNVSVATALILYEAQRQR 168
            + +  D  V IPM G V SLNVSVAT + L+EA RQR
Sbjct: 207 LSRECCDTLVSIPMSGSVSSLNVSVATGICLFEAVRQR 244