Pairwise Alignments

Query, 700 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Kangiella aquimarina DSM 16071

Subject, 696 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  466 bits (1199), Expect = e-135
 Identities = 279/665 (41%), Positives = 380/665 (57%), Gaps = 13/665 (1%)

Query: 19  SLKGVGPKVAEKLEKLHIQSVLDLLFHLPLRYEDRTRVRTIASLKDGERALIKVTVELAQ 78
           +L G+G K A+ L  + I    DL+F LP    +R  V T+ +        + VTV    
Sbjct: 17  TLPGIGKKTAQTLAHMDIARPRDLIFTLPSSGIERRLVDTVQTGPFPSVMTVPVTVTRHL 76

Query: 79  VKFGKRRSLVCRASDESASIDFRFFYFNKGQQQRL-QRGAEFYAFGEVRRYGFQFSMVHP 137
              GK R      +D + +I   +F+       +L   GA     G V  Y  Q  M HP
Sbjct: 77  PPSGKGRPYRIEVADAATTITLVYFHARGDYLMKLLPPGARRIISGRVELYDGQAQMPHP 136

Query: 138 ELTAINSGTSAPLLESLTPIYPATEGLHQASFRHMMRQAVTLLKQHPIDNLLPSSILQSL 197
           +   + +   A  L    P+YP T G+ Q + +  +  A+  +    +      +++   
Sbjct: 137 D--HVLTEAEAETLGGFEPVYPLTAGITQKTMQKAVAGALDRVPD--LAEWADPALVAQE 192

Query: 198 KLPDINASLAWIHSPPKDADLAQLQSNQTPAVRRLISEELLAQQLSLLLQRNQQKDYSAP 257
             PD  ++LA  H+P    +L       TPA RRL  +ELLA Q +L L R  ++     
Sbjct: 193 GWPDFASALASAHAPQSMKELGP----DTPARRRLAYDELLAHQTTLALARAHRRRAPGR 248

Query: 258 VFKHSGKLQSQLLKQLPFKPTAAQKRVIQEIIHDLEQPHPMLRLLQGDVGAGKTLVAAQA 317
                G+    +L  LP+ PT AQ+RVI EI  DL  PH M RLLQGDVGAGKTLVA  A
Sbjct: 249 RLTGDGRRVGPVLAALPYTPTGAQQRVISEITEDLAAPHRMNRLLQGDVGAGKTLVALVA 308

Query: 318 ALQAIEAGFQVAVMAPTELLADQHYQSFSQWFEAMNIPCVFLASKLNASQRKAALEVIAS 377
            L A+EAG Q  +MAPTE+LA QH  +     EA  +    L  +    +R A L  +A+
Sbjct: 309 MLLAVEAGTQAVMMAPTEILARQHLAALLPLAEAAGVVVEVLTGRDKGRERAAKLAALAA 368

Query: 378 GEAKLIVGTHALFQKGVEYHNLGLAIIDEQHRFGVNQRLMLKQKAPEGMQLHQLMMTATP 437
           G+  ++VGTHA+FQ  V +H+LGLA+IDEQHRFGV +R+ L  K   G  +  L+MTATP
Sbjct: 369 GDIHILVGTHAVFQDDVAFHDLGLAVIDEQHRFGVRERMRLGAK---GAAVDVLVMTATP 425

Query: 438 IPRTLAMTVYADMDVSIIDELPPGRTPVQTVALSDQKREQVIKRIETACRDENRQVYWVC 497
           IPR+LA+  Y DMDVSI+DE PPGRTPV+T  +S  + ++++  ++ A   E RQVYWVC
Sbjct: 426 IPRSLALVTYGDMDVSILDEKPPGRTPVKTALVSADRLDELLAHLDAAL-SEGRQVYWVC 484

Query: 498 TLIDESEEIQCQAAESAANLLTQQLPACRVGLLHGRLKPEQKQMVMDKFKQGELDILVAT 557
            L++ESE +   AAE     L  +    RVGL+HG++   +K   M  F  GE  +LVAT
Sbjct: 485 PLVEESETLALTAAEERFKHLRARFGEGRVGLVHGQMPVAEKDAAMADFVAGETRLLVAT 544

Query: 558 TVIEVGVDVPNASLMVIENPERLGLSQLHQLRGRVGRGSVESHCVLLYQHPLSDNAKARI 617
           TVIEVGVDVPNAS+MVIE  E  GL+QLHQLRGRVGRGS  S C+LLY  PL + A  R+
Sbjct: 545 TVIEVGVDVPNASIMVIEGAEHFGLAQLHQLRGRVGRGSTASSCLLLYAPPLGETATKRL 604

Query: 618 QVMRETNDGFVIAEEDLRLRGPGEMLGTRQTGEVSLRFADLVRDAELIPAIQQQAHDLIA 677
           ++MRET DGF I+E D+ +RG G+++GT Q+G    R ADL R A L+   Q  A  L+A
Sbjct: 605 KLMRETEDGFRISEADMEMRGAGDLIGTAQSGLPRFRIADLERQAGLMAMAQSDARALLA 664

Query: 678 ENNEL 682
           ++ +L
Sbjct: 665 KDPKL 669