Pairwise Alignments

Query, 912 a.a., DNA polymerase I (EC 2.7.7.7) from Kangiella aquimarina DSM 16071

Subject, 923 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score = 1118 bits (2892), Expect = 0.0
 Identities = 579/920 (62%), Positives = 703/920 (76%), Gaps = 18/920 (1%)

Query: 7   PFILVDGSSYLFRAYHVPQLQRMTNSKGMMTGAVFGVINMLKSLIKEFEPEHMAVVFDAK 66
           P ILVDGSSYL+RAY+ P    +TNSKG  TGAV+GV+NML+SL+  + P  MAVVFDAK
Sbjct: 8   PLILVDGSSYLYRAYYAPP--HLTNSKGEATGAVYGVVNMLRSLLSRYRPTQMAVVFDAK 65

Query: 67  GKTFRNDLYPEYKANRPPMPEDLRQQIEPIHEIVKAMGLPLLVIEGVEADDVIGTLAKQA 126
           G TFRN++Y EYKA+RPPMP+DLR QI P+H I+KA+G+PL+ I GVEADDVIGT+A QA
Sbjct: 66  GPTFRNEMYQEYKAHRPPMPDDLRSQIAPLHRIIKALGIPLISIPGVEADDVIGTIAIQA 125

Query: 127 CNEGRETLISTGDKDMAQLVSEHVTLINTMDKNNPITDRERVVEKFGVKPEQIIDYLALV 186
            NEGR  LISTGDKDMAQLV+EH+TLINTM   + I   E V  KFGV PE IID LA++
Sbjct: 126 GNEGRSVLISTGDKDMAQLVNEHITLINTM--TDTILGPEEVATKFGVGPELIIDLLAMM 183

Query: 187 GDKVDNIPGVDKCGPKTAVKWLEQYDSLQGVIDHADEI------GGK-IGENLREAIDRL 239
           GDK DNIPG+   G KTA+  L     +  ++   D +      G K +   +R+  + L
Sbjct: 184 GDKADNIPGLPGVGEKTALAMLTGAGGVAKLLAEPDCVTDLGFRGAKTMAAKIRDNAEML 243

Query: 240 PLSYELATIKLDCELEYKPGELNIGNPDHKELKKLYGEMEFKRWLTEVLKE---LGEGDE 296
            LSY+LATIK D  LE    +L++  P+  EL   YGEMEFKRWL EVL     LG    
Sbjct: 244 ELSYKLATIKTDVTLEQDWHQLSLSEPNRDELIACYGEMEFKRWLAEVLDNKSPLGTKAA 303

Query: 297 SSQDGE--SESGVALVDRSKYETILEQQDLDKWIQKLKEAELFSFDTETTSLNYIEAELV 354
           + Q  +  +ES  A V  ++Y T+L + +LD W+ KL +AEL + DTETTSL+Y++AELV
Sbjct: 304 APQANQETTESPAAAVIETQYHTLLTESELDAWLDKLSKAELIAVDTETTSLDYMQAELV 363

Query: 355 GMSFGLDNGEAAYLPVAHSYMGAPKQLDRGEVLEKLRPLLESEKHKKVGQNLKYDMSVLA 414
           G+SF ++ G+AAYLP+ H Y GAP QL R   L KL+PLLE+   KKVGQNLKYDMSVLA
Sbjct: 364 GLSFAIEAGKAAYLPLGHDYPGAPSQLPREATLAKLKPLLENPDIKKVGQNLKYDMSVLA 423

Query: 415 NYGIELGGIEFDTMLESYCLNSVASRHDMDTLALHHLNHVNIKFEEIAGKGKNQLTFDQI 474
           N GI+L G+ FDTMLESY  NSVASRHDMD LAL +L H NI FEEIAGKG  QLTF+QI
Sbjct: 424 NAGIQLKGVAFDTMLESYVFNSVASRHDMDGLALKYLGHKNISFEEIAGKGAKQLTFNQI 483

Query: 475 EIEQAAPYAAEDADITMRLHQKLWPELKESEGPTQVFEHIEMPLLRVLSKVERNGVLVDG 534
            +EQAAPYAAEDADIT+RLHQ LWP L + EG   VF  +E+PL+ VLS +ER GVL+D 
Sbjct: 484 ALEQAAPYAAEDADITLRLHQHLWPRLSKEEGLESVFTELELPLIEVLSDIERRGVLIDS 543

Query: 535 KLLLEKSHLFEKRLKELEKEAFEIAGKEFNLGSPKQLQSIFYEELGLPILKKTPKGQPST 594
            LL ++S    +++ ELE+ A EIAG+ FNL S KQLQ +F+ +LG P++KKTPKG PST
Sbjct: 544 MLLGQQSEELARKIDELEQHAHEIAGEPFNLSSTKQLQELFFTKLGYPVIKKTPKGAPST 603

Query: 595 AEEVLQELALDYPLPKLILEHRSLSKLKSTYTDKLPQMINDKTGRVHTSYHQAVAATGRL 654
           AEEVL ELALDYPLPK+ILEHRSL+KLKSTYTDKLP MIN +TGRVHTSYHQA AATGRL
Sbjct: 604 AEEVLVELALDYPLPKIILEHRSLTKLKSTYTDKLPLMINGRTGRVHTSYHQANAATGRL 663

Query: 655 SSTDPNLQNIPIKTEEGRSIRTAFIAPKGHKILAADYSQIELRIMAHLSQDKGLLKAFEE 714
           SS+DPNLQNIPI+TEEGR IR AF+AP+G +ILAADYSQIELRIMAHLSQD+GLL+AF E
Sbjct: 664 SSSDPNLQNIPIRTEEGRRIRQAFVAPEGKRILAADYSQIELRIMAHLSQDEGLLRAFAE 723

Query: 715 GLDVHSATAAEVFDVPLEEVTSNQRRNAKAINFGLIYGMSAFGLAKQIDTDRNTAQDYIN 774
           G D+H ATAAEVFDV  E VTS QRR AKA+NFGLIYGMSAFGLA+Q+D  RN AQ YI+
Sbjct: 724 GKDIHRATAAEVFDVAFETVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEAQSYID 783

Query: 775 TYFARYPGVETYMESTRQKAADLGYVETLYGRRLYLPEIHSKNGMRRKAAERTAINAPMQ 834
           TYF RYPGV  YME TR  A++ GYV TL+GRRLYLPEI  +N MRR+AAER AINAPMQ
Sbjct: 784 TYFKRYPGVLKYMEETRAMASEQGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAPMQ 843

Query: 835 GSAADIIKLAMLEVDKWLQ-DVKG-IKMIMQVHDELVFEVEESQLELAQKKIPELMESVA 892
           G+AADIIK AM+ +  W++ + +G I+MIMQVHDELVFEV+  + +  ++K+ ELM + A
Sbjct: 844 GTAADIIKKAMIAIQHWIKTETQGEIQMIMQVHDELVFEVDADKADALKEKVCELMAAAA 903

Query: 893 ELSVPLIADVGIGENWEEAH 912
            L VPL+A+ G+G+NW++AH
Sbjct: 904 SLDVPLLAEAGLGDNWDQAH 923