Pairwise Alignments

Query, 726 a.a., Superfamily I DNA and RNA helicases from Kangiella aquimarina DSM 16071

Subject, 721 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  874 bits (2257), Expect = 0.0
 Identities = 436/727 (59%), Positives = 554/727 (76%), Gaps = 12/727 (1%)

Query: 1   MDASSIIQPLNDAQKEAVTAPNKALLVLAGAGSGKTRVLVHRIAWLVQVERVSAHSILAV 60
           MD S II PLNDAQ+EAVTA N  LLVLAGAGSGKTRVLVHRIAWL+ V+RV    ILAV
Sbjct: 1   MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAV 60

Query: 61  TFTNKAAKEMLGRVEDMLAMPARGMWIGTFHSIAHRLLRAHYRDAGLPEGFQILDAQDQL 120
           TFTNKAAKEM  R+E M+ +PARG+W GTFH IAHRLLR+H++DAGLPE FQ+LD+ DQL
Sbjct: 61  TFTNKAAKEMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL 120

Query: 121 RVIKRVMKELNLDDNEWPPKQAQWFINAKKDDGLRPGDIHHH-GDFFVSTMVKVYYAYEE 179
           R+IKRVM+E  +D+++WPPKQAQWFI+++KD+GLR   I  + GD F+S M+K+Y  YE+
Sbjct: 121 RLIKRVMRENQIDESKWPPKQAQWFISSQKDEGLRVDHIQENPGDHFLSIMLKIYRQYEK 180

Query: 180 ACKRGGLVDFNELLLRAYELWANNPHLLKHYQDRFQHILVDEFQDTNAIQYAWIRLLCND 239
            C++GGLVDF ELLLR++ELW + P LL HYQ RFQHILVDEFQDTN IQYAW+++L ++
Sbjct: 181 LCQQGGLVDFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASN 240

Query: 240 NNRITIVGDDDQSIYGWRGARIENIQQFEKDFPDCKVSRLEQNYRSTSTILKAANAVIAN 299
              +T+VGDDDQSIYGWRGA++ENIQQ+++DFP+ ++ RLEQNYRST  ILKAANAVIAN
Sbjct: 241 RVPMTVVGDDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIAN 300

Query: 300 NQDRMGKSLWTEGNQGEPIILYSAFNEQEEARFIAARIEDWVQQGNSYDDIAILYRSNAQ 359
           NQ R+GK LWT+G +GEPI LY+AFNEQ+EA +IA  I  WVQ GN   + AILYRSNAQ
Sbjct: 301 NQGRLGKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSNAQ 360

Query: 360 SRILEDAMLQKGIPYRIYGGLRFFERAEIKDTLAYMRLMANRDDDTSFERVVNQPARGLG 419
           SR+LE++++++GIPYR+YGGLRF++R EI++ LAY+RL+  R DD +FERVVN P RG+G
Sbjct: 361 SRVLEESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIG 420

Query: 420 EKSVDMIRMQARQDETSLWQAASKMVVEQLLPPRAKNALGGFLHLINELETSTAELDLWE 479
            KS+  +R  A +   SLW++A +++    +  RAK  L  F+ +I  L     +  L  
Sbjct: 421 AKSLAELREYATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASLHG 480

Query: 480 QTDIVIEHSGLLDMYSKEKGEKGQARKENLQELVNATREFDPDEAIPDETPDMTPLQAFI 539
                IE+SGL D ++ EKGEKGQAR ENL+ELVNA  +++ ++ +         L  FI
Sbjct: 481 LMKQTIENSGLKDYHASEKGEKGQARVENLEELVNALSDYEVEDGV-------DALSEFI 533

Query: 540 AHATLEAGETQADEYQESVQMMTLHSAKGLEFPLVFIAGVEEKLFPHQMSLDEPGGLEEE 599
           A A L+AGE+QA ++++SVQ+MTLHSAKGLEFPLVF+AGVEE LFPH MSL+EPG +EEE
Sbjct: 534 AQAALDAGESQAGDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEE 593

Query: 600 RRLAYVGITRAMKQLYLTFAEKRRIFGRETYPQQSRFIREIPDELLTEVRLNTRVQRPVF 659
           RRLAYVGITRAMK+L LT+AE RR++G+E +   SRF+REIP + L EVRL   V RP  
Sbjct: 594 RRLAYVGITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTRPAM 653

Query: 660 NRSPKSPI---QRKGPEGFYLGQLVKHPKFGKGIIINYEGEGPQASVQINFEKEGLKKLM 716
              P   +         GF LGQ V+HPKFG+GI++N EG G    VQ+NF+ EG K L+
Sbjct: 654 VERPNESMFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFD-EGAKWLV 712

Query: 717 LAYAKLE 723
           LAYA LE
Sbjct: 713 LAYAPLE 719