Pairwise Alignments

Query, 388 a.a., ATP-binding protein from Herbaspirillum seropedicae SmR1

Subject, 347 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  216 bits (549), Expect = 1e-60
 Identities = 137/373 (36%), Positives = 186/373 (49%), Gaps = 42/373 (11%)

Query: 12  IPVSLLTGFLGSGKTTLLNHLITQPEMKDTLVIINEFGEIGLDHLLVAHSQEETIVEMSS 71
           +PV+LLTGFLG+GKTTLLN L+  P M+D  VI+NEFG + +DH LV  +  E     ++
Sbjct: 1   MPVTLLTGFLGAGKTTLLNELLAAPAMRDAAVIVNEFGSVPIDHGLV-RTGSERYFHTTT 59

Query: 72  GCLCCTIRGDLKKTLKDITWRFAEGGRRKFNRVVIETTGLASPAPILHTL---------M 122
           GC+CCT   D++ +L ++     EG   + +RVVIETTGLA PAPI+++L         +
Sbjct: 60  GCICCTASSDIRTSLYELHQVSLEGVMPEISRVVIETTGLADPAPIINSLIAGGTPALGL 119

Query: 123 TDAFIAERYRLDGVIVTVDAVNGMSTLDHHEEAVQQAAVADRLLLTKTDLVDAATLAALQ 182
            D  +A  + L GV+   D ++G + LD   E  +Q A AD ++LTKTDL DAA +   Q
Sbjct: 120 RDHIVARHFHLSGVVTVFDVISGRAMLDSFIEGWKQLAFADHIVLTKTDLADAAAID--Q 177

Query: 183 ARLRTLNPGARQLQPQVGQIAAAELLDAGLFKPGEKMPDVARWLNEEAFAEQARHGHGHH 242
             L  LNP A              L     +    K  DV  WL  +  +          
Sbjct: 178 KSLTDLNPAAHLHDRNAADFDLMSLFSTKDYSLHGKTEDVPGWLAADRLS---------- 227

Query: 243 GHHHGHDHHHGHDHGHDHHGHDHEHDVNRHDDHIRAFCFTFDEPIDPVLFDEWLSLLVGF 302
             H GHD                 HD+NRH   + AF  TFD  +DP     +L L+   
Sbjct: 228 -LHAGHD-----------------HDINRHGAGVEAFDLTFDGALDPQAIVTFLELVTSN 269

Query: 303 KGPNILRIKGILNLKGE-ALPTVIHGVQHIFHPTATLPQWPSEDRRSRIVFITRDVERAT 361
               +LR+KGI     +   P V H VQH  +P   L  WP  DR +RIV I  DV +  
Sbjct: 270 VHSGLLRLKGIFGATDDPERPVVAHAVQHRLYPLIRLESWPDGDRSTRIVMIGMDVPQQP 329

Query: 362 IERSFDAFMQAQA 374
           I   F+A + AQA
Sbjct: 330 IRDLFNA-LAAQA 341