Pairwise Alignments

Query, 394 a.a., acyl-CoA dehydrogenase from Herbaspirillum seropedicae SmR1

Subject, 412 a.a., acyl-CoA dehydrogenase/oxidase family protein from Pseudomonas putida KT2440

 Score =  213 bits (541), Expect = 1e-59
 Identities = 139/390 (35%), Positives = 206/390 (52%), Gaps = 16/390 (4%)

Query: 10  EAIAAA-RKLAEDFSREAALRDRERKLPWDELERYVRSGLWGITVPKEYGGAGVSYGTLA 68
           E++AA  R +    +  +  R+R+R LP + ++    +G   + VP E GGAG S   L 
Sbjct: 17  ESLAARFRPIFTRIAESSVARERDRTLPHEPIQWLKDAGFGAVRVPVEQGGAGASLPQLF 76

Query: 69  EVIATISAADGSIGQIPQNHFYAVELIRVNGSESQKR-FFFERVLQGDRFGNALAELGTK 127
           +++  ++ AD ++ Q  + HF  VE  R+N   S  +  +F+R + GD  G A  E+G  
Sbjct: 77  QLLIELAEADSNVPQALRGHFAFVE-DRLNAHASTPQDVWFKRFVDGDLVGCAWTEVGAV 135

Query: 128 TSHDRKTRLSRNAHGPGYRIDGRKFYATGALYADWVPTSVI-DDDGVQQLAIVPRHAPGL 186
              D  TR+SR   G  + ++G K+Y+TG+L++DW+      DD G   +A +    PG+
Sbjct: 136 KIGDVSTRVSRR--GDQWVVNGTKYYSTGSLFSDWIDLFARRDDTGGDVIAAIRTRQPGI 193

Query: 187 TIIDDWSGFGQRTTGSGSAVFENVHVPADAVIGFATAFSRPTQIGPMAQIQHAAIDLGIA 246
           T  DDW GFGQRTTGSG++VFEN  V  + +I FAT F   T      Q+   A+ +G  
Sbjct: 194 TQSDDWDGFGQRTTGSGTSVFENAVVEEENIIDFATRFKYQTAF---YQLVLLAVIVGSG 250

Query: 247 RAAYADLLTFVRTRSRAWVDSGVERAVDDPLTIREVGDLTIQLHAAEALLRRAGRKVDAA 306
           RAA  D     R R+R +         +DP  ++ +G  +  ++AAEA   RA      A
Sbjct: 251 RAAVRDFSQETRKRTRVFSHGNGAAVSEDPQVLQVIGKASGLIYAAEAGTLRASEAAQQA 310

Query: 307 AAAP---DEDSVAAASIAV----AEARVLTTEVSLAAGSKLFELAGSQSTLAEHNLDRHW 359
             A    DE++   A+IA     A+A+V   E  L A S LF   G+  T     LDRHW
Sbjct: 311 YLARFGNDENAERKANIAAELESAQAQVAAIEAVLRATSDLFNTLGASGTSTTKQLDRHW 370

Query: 360 RNARTHTLHDPVRWKYHAIGNYVLNGKKPP 389
           RNART   H+PV +K   IG++ +NG +PP
Sbjct: 371 RNARTAASHNPVIYKERIIGDWHVNGSEPP 400