Pairwise Alignments

Query, 582 a.a., methyl-accepting chemotaxis protein from Herbaspirillum seropedicae SmR1

Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  337 bits (865), Expect = 5e-97
 Identities = 216/522 (41%), Positives = 321/522 (61%), Gaps = 16/522 (3%)

Query: 1   MSGSMTVGRKLGL--AFLCVVVVALVGSSLSLLNFNRLEDASAMNIHTYQVMGKADDMLL 58
           MS  + +G++L L  A L V+++ L G+  +++    +  A  +N      +    ++ L
Sbjct: 1   MSQRLNLGQRLLLINATLVVLLLVLAGTVWTMMG-RVVMAADRINETNVPQLQTIAELEL 59

Query: 59  NMVNIETGIRGYVASGNEAFLDPYKGGRKDFKVAFDDAKSLTADNPVQ---QKRLAEMQE 115
           N+      +R  + S N   LD       + K    DA  +  +  +    ++  A +  
Sbjct: 60  NVTRTSLQVRHAILSRNPQELDATLADIGEKKRLLLDALKVFGEGMIDDAGREAFAPLPA 119

Query: 116 LSNKIEEIDQNLIKLRKEANASGSQQALQTYFGATHDKIFMDRFRVVQKEFVDAEESLLK 175
           L  +   I +  +KL +E     +   L  +     + +       + KE     E L  
Sbjct: 120 LMTEFWRIGEANVKLIQEGKKEEAFAYLVDHTIPARNALLAP----LAKEKKRQGERLAF 175

Query: 176 ERGELVRSLSKSTLIVMIAAGALTVLLAIG-AGLLI-TRSIINALGGEPGAAADVAQQIA 233
              E+         IV+I+     V++A+G AGL I  R ++ +LG +P     +A  +A
Sbjct: 176 RINEIESLSVLDRNIVVISV----VVVALGLAGLAIYLRKVVRSLGADPDELKRIADAVA 231

Query: 234 AGDLTVAVPLKPNDSHSLMASLGSMREQLTTIVRGIQTSGESISVAANEIATGNTDLSQR 293
           AGDL V++ ++  D+HS +A L +M E+L T V  ++   E++S  + EIA+GN+DLS+R
Sbjct: 232 AGDLGVSMRVREGDTHSALAKLRTMTERLATSVHAVRQGAEAVSNGSAEIASGNSDLSRR 291

Query: 294 TEEQAASLEETASSMEELTSTVRQNSDNARQANTLAENASTLAAKGGEVVSRVIDTMNEI 353
           TE QA++LE+T++SME+L STV QN+D+AR AN LA+ AST+A +GGEVV++V+DTM  I
Sbjct: 292 TESQASALEQTSASMEQLGSTVTQNADHARTANQLAQGASTVAQQGGEVVNQVVDTMKGI 351

Query: 354 SDSSSKVSDIITVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAA 413
            +SS K++DII VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRS  AA
Sbjct: 352 ENSSRKIADIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSGQAA 411

Query: 414 KDVKDLITLSGERVERGTHLVGEAGQTINEVVQAVRNVTDIMNEITAASSEQTTGIEQVN 473
           K++KDLI  S ERV RG  L  +AG T+ EVV ++R V+D++ EI++AS+EQ+ G+ QV 
Sbjct: 412 KEIKDLIGESVERVARGVTLADKAGTTMQEVVGSIRRVSDLVGEISSASAEQSAGVSQVG 471

Query: 474 QALSQMDQVTQQNAALVEQAAAAAQAMSEQATELRSAVGVFK 515
           +A+ QMDQ TQQNAALVEQ +A+A ++ +QA +L  AV VF+
Sbjct: 472 EAVIQMDQTTQQNAALVEQMSASATSLRQQAEDLVRAVAVFR 513