Pairwise Alignments

Query, 406 a.a., RND transporter MFP subunit from Herbaspirillum seropedicae SmR1

Subject, 388 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  151 bits (381), Expect = 4e-41
 Identities = 113/360 (31%), Positives = 168/360 (46%), Gaps = 14/360 (3%)

Query: 60  AGTAERAKMFVRVAPVRSSAEGQTLALPGTLQGFVQSPISARSGGYLKRWTKDIGAEVKK 119
           A +A R  + VRV P R+          GT+  +    + +R  G L R     G +V +
Sbjct: 27  APSAWRGPVAVRVEPARTEDFTVQARAVGTVAPYNTVTVRSRVDGQLARVLVREGQKVAR 86

Query: 120 GELLAELDTPEIDQQLTQALAAREQAASSMELARSSMARWEALRKKDAVSQQELDERRSA 179
           G+LLAE+D   +   L QA   ++Q  + +  A S +AR+E L K+DAV++Q LD + + 
Sbjct: 87  GQLLAEIDPEPLRVALAQAQGQQQQNLAQLRNAESELARYELLFKRDAVARQVLDRQAAL 146

Query: 180 FAQASANLAAADANVGRLRQVEGFKRIVAPFSGIITRRNVDVGDLIDPGAGRALFVLSQT 239
             Q    L + +A V   +    + RIVAP +G I  R VD G+L+       LF L+QT
Sbjct: 147 VQQLRGTLKSDEAQVDNAKLQLSYTRIVAPIAGRIGLRRVDAGNLLSANDANGLFTLTQT 206

Query: 240 DPLRVYVNVPQSYANLV------KPGQQVTVTQSELRGRKFEGKVARTAGAIDAATRSMQ 293
            P+ V  NVP+     V      K   Q      + R R  +G++      IDAAT +++
Sbjct: 207 QPVSVVFNVPEPQVAEVRAAHDGKQPPQAEAWDRDNRSRLAQGRLDTLDNQIDAATGTLR 266

Query: 294 VEVTLSNADHALLPGAFVQVALPIKP-SGALLVAADTLMFRRDGTLVAAVDPHNQVRLKK 352
           ++    NAD AL P  FV V L ++   GA+ +  D +     GT V  V   N+ +++ 
Sbjct: 267 LKARFENADDALFPNQFVNVRLALRQLPGAVTIPTDAVQHGSRGTYVYVV-ADNKAQVRD 325

Query: 353 LRLGRNFGQTVEVLDGLQGDEHLILNPSDALAEGDQV------EPTLEQPKEPEKQKAAS 406
           L LG   G    VL GL   E ++L   D L  G  V      E     P  P+   AA+
Sbjct: 326 LTLGPASGGRTVVLKGLVSGEPVVLEGLDRLENGRAVNVVQAAELPASSPLAPDAAPAAA 385