Pairwise Alignments

Query, 150 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 146 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 89.4 bits (220), Expect = 2e-23
 Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 1/127 (0%)

Query: 4   FKRKLVYACLFEALAIVFTTVGLSVLGGHDSGHATAAAVASSTIAFVWNFIFNGLFERWE 63
           F  +LV+A  +E  A++     LS + G     A   AV  S IA +WN ++N L +RW 
Sbjct: 10  FTERLVHAVGYEVFAVLLCAPLLSWIMGKSLATAGTLAVTLSVIAMLWNMVYNVLVDRW- 68

Query: 64  ARQPRRGRNFARRAAHAIGFEGGLVLMLVPLFAWWLDISLWNAFVLDLGLIVFFMIYTYL 123
            +  R     + R  H +GFE GLV+  +P+ AW L+ISL  AF+++LG  V  + YT +
Sbjct: 69  VQTERINWKASTRFVHGLGFEAGLVVWCLPVAAWMLEISLLQAFMVELGFFVIILPYTVV 128

Query: 124 FNLLFDR 130
           +N  FD+
Sbjct: 129 YNWAFDK 135



 Score = 44.7 bits (104), Expect = 6e-10
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 72  NFARRAAHAIGFEGGLVLMLVPLFAWWLDISLWNAFVLDLGLIVFFMIYTYLFNLLFDR 130
           +F  R  HA+G+E   VL+  PL +W +  SL  A  L + L V  M++  ++N+L DR
Sbjct: 9   SFTERLVHAVGYEVFAVLLCAPLLSWIMGKSLATAGTLAVTLSVIAMLWNMVYNVLVDR 67