Pairwise Alignments

Query, 505 a.a., D-ribose transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

Subject, 506 a.a., fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  369 bits (948), Expect = e-106
 Identities = 200/497 (40%), Positives = 308/497 (61%), Gaps = 10/497 (2%)

Query: 12  VLSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIHL 71
           +L +SGI K F GV AL +V   VRP  + AL+GENGAGKSTL+K L GI+Q D G+I  
Sbjct: 13  LLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGTILF 72

Query: 72  GGREVRFASAQDAMRGGITAVHQETVMFEELSVAENIWIGRQPLCGTPRRIDWRRMEDEA 131
            G+E+ F SA++A+  GI+ VHQE  +  + SV +N+W+GR P  G    +D  +M  E 
Sbjct: 73  QGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGM--FVDQDKMYRET 130

Query: 132 RALFARLEVDLPVRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGELYR 191
           +A+F  L++D+  RARV  LSV+Q   +EIA+A S  A++VIMDEPT++L+  E+  L+ 
Sbjct: 131 KAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFT 190

Query: 192 IIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVGREV 251
           II +L+  G  +++ISHK +EI+ + D  TVLRDG++IA+  LA +T  +++A+MVGR +
Sbjct: 191 IIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIAMMVGRSL 250

Query: 252 GQVFSRAASNTEDQTAPVLEVKHLSHPSEFDDVSFAVRPGEILGFYGLVGAGRSEVMHAL 311
            Q F    +   +    V  +  L  PS   DVSF +  GEILG  GLVGA R++++  L
Sbjct: 251 NQRFPDKENKPGEVILEVRNLTSLRQPS-IRDVSFDLHKGEILGIAGLVGAKRTDIVETL 309

Query: 312 FGLSPEAQGAVWIDGREVKLCSPAQAIAHGLAYVPEDRQRQGALLSLPIFQNITLPVLPG 371
           FG+  ++ G + + G+++   +  +AI HG A V E+R+  G    L I  N  +  +  
Sbjct: 310 FGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRN 369

Query: 372 ----IGFFLRRHRRREIDIARRLCEQLELKASHFHQHVAQLSGGNQQKVVLAKWLATQPR 427
               +G  L  + R + D  + + + + +K       +  LSGGNQQKV++ +WL TQP 
Sbjct: 370 YKNKVG--LLDNSRMKSD-TQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPE 426

Query: 428 VLILDEPTKGIDIGSKAAVHRFIGELVAQGLAVILVSSELPEVMGMSDRIVVMHQGRVQQ 487
           +L+LDEPT+GID+G+K  +++ I EL  +G  +I++SSE+PE++G++DRI+VM  G V  
Sbjct: 427 ILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSG 486

Query: 488 VFSRAEASAEALAAAAS 504
           +      +   +   AS
Sbjct: 487 IVDTKTTTQNEILRLAS 503