Pairwise Alignments

Query, 505 a.a., D-ribose transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

Subject, 510 a.a., D-allose ABC transporter ATP-binding protein AlsA from Escherichia coli ECOR38

 Score =  367 bits (943), Expect = e-106
 Identities = 203/507 (40%), Positives = 317/507 (62%), Gaps = 18/507 (3%)

Query: 11  PVLSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIH 70
           P +S++GIGK F  V AL+ V  TV PGE+ ALLGENGAGKSTL+K+L+GIH+P +G+I 
Sbjct: 4   PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTIT 63

Query: 71  LGGREVRFASAQDAMRGGITAVHQETVMFEELSVAENIWIGR---QPLCGTPRRIDWRRM 127
           +          + A + GI  ++QE  + +EL+V EN++IGR   + +CG    IDWR M
Sbjct: 64  INNINYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGV-NIIDWREM 122

Query: 128 EDEARALFARLEVDLPVRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIG 187
              A  +  R+ + + +  +V +LS++ +  +EIA+ L   A+V+IMDEPT++L++ E+ 
Sbjct: 123 RVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVD 182

Query: 188 ELYRIIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMV 247
            L+ I+ QLR+ GTA+++ISHK  EI  + DRYTV++DG  + SG ++D++   +V LMV
Sbjct: 183 YLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSNDDIVRLMV 242

Query: 248 GREVGQVFSRAASNTEDQT-APVLEVKHLS--HPSEFDDVSFAVRPGEILGFYGLVGAGR 304
           GRE+   F+    N  +     V EV++++     +  D+SF+V  GEILGF GLVG+GR
Sbjct: 243 GRELQNRFNAMKENVSNLAHDTVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGSGR 302

Query: 305 SEVMHALFGLSPEAQGAVWIDGREVKLCSPAQAIAHGLAYVPEDRQRQGALLSLPIFQNI 364
           +E+M+ LFG+   A G + ++ +++   SP  A+  G+AY+ E R+  G   +  I QN+
Sbjct: 303 TELMNCLFGVDKRAGGEIRLNDKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNM 362

Query: 365 TLP-------VLPGIGFFLRRHRRREIDIARRLCEQLELKASHFHQHVAQLSGGNQQKVV 417
            +            +G F   H   E   A    E L LK    +Q++ +LSGGNQQKV+
Sbjct: 363 AISRSLKDGGYKGAMGLF---HEVDEQRTAENQRELLALKCHSINQNITELSGGNQQKVL 419

Query: 418 LAKWLATQPRVLILDEPTKGIDIGSKAAVHRFIGELVAQGLAVILVSSELPEVMGMSDRI 477
           ++KWL   P V+I DEPT+GID+G+KA +++ + +L   G  +++VSSELPE++ + DRI
Sbjct: 420 ISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRI 479

Query: 478 VVMHQGRVQQVF-SRAEASAEALAAAA 503
            V  +GR+ Q+  +R + S E + A A
Sbjct: 480 AVFCEGRLTQILTNRDDMSEEEIMAWA 506