Pairwise Alignments

Query, 271 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 242 a.a., basic amino acid ABC transporter substrate-binding protein from Fusobacterium nucleatum SB010

 Score =  142 bits (358), Expect = 7e-39
 Identities = 83/226 (36%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 44  APARVYVVGVESAYAPFSSENEQKDVVGFDIDIMKALAKKIGIEVKFVPTPFEGFFNFLA 103
           A + V  VG  + +APF    + K +VGFDID++ A++K+ G+E K     F+G    L 
Sbjct: 23  AKSNVVYVGTNAEFAPFEYLEKNK-IVGFDIDLLDAISKETGLEFKIQDMAFDGLLPALQ 81

Query: 104 QGDRDLLISAITITDERKKSVAFSEPYFVATQTIALPAADTKVSKMEDLKPLTVGTQSAT 163
               D++I+ ++ T ER+K+VAFS+PYF A Q +     D  +   +DL    VG     
Sbjct: 82  TKKIDMVIAGMSATPEREKAVAFSKPYFKAKQVVITKGVDKSLKSFKDLAGKKVGVMLGF 141

Query: 164 SGDELVQQVLGKNSAKIKRFDSTPLALKELESGGVDAVVADEPVVKNYIANNPNSKLRTV 223
           +GD +V ++ G    KI+RF++   A+  L    VDAVV D    K Y ANN   K   +
Sbjct: 142 TGDTVVSKIKG---VKIERFNAAYAAILALSQNKVDAVVLDSEPAKKYTANN---KQFVI 195

Query: 224 TDPSFPKEDYGIAVRKDDPELLAKINKGLAEMKADGSFAAISAQYF 269
            +    +EDY IA RK+D EL+ K+N  L ++KA+G +  I  +YF
Sbjct: 196 ANIPAEEEDYAIAFRKNDKELINKVNVALDKIKANGEYDKILKKYF 241