Pairwise Alignments

Query, 158 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 183 a.a., Uncharacterized ABC transporter, periplasmic component YrbD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  134 bits (338), Expect = 6e-37
 Identities = 75/163 (46%), Positives = 108/163 (66%), Gaps = 7/163 (4%)

Query: 1   MQRKSLDAWVGIFVLLGVAALVFLALKAGNMSSMSFGQKTYTIKASFDNIGGLKSRAAVK 60
           MQ K  + WVG+F+L+ + A +F+ LKA N++SM   + TY + A+FDNIGGLK R+ V+
Sbjct: 1   MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRT-EPTYKVYATFDNIGGLKVRSPVR 59

Query: 61  SAGVVVGRVDSIRFDDQTFRAVVSLNMDESYK-FPKDSSAKILTSGLLGEQYIGIEPGGD 119
             GVVVGRV+ I  D +T+   V+L+++E Y   P  SS  I TSGLLGEQY+ +  G +
Sbjct: 60  IGGVVVGRVEDISLDPKTYLPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119

Query: 120 -----TANLASGDTIKMTQSAIVLENLIGQFLYSKAAEGKDDS 157
                T+ L  G TI+ T+SA+VLE++IGQFLY+   +   +S
Sbjct: 120 DPELGTSILKDGSTIQDTKSAMVLEDMIGQFLYNSKGDDNKNS 162