Pairwise Alignments

Query, 158 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 183 a.a., OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein from Escherichia coli BL21

 Score =  135 bits (341), Expect = 3e-37
 Identities = 78/163 (47%), Positives = 106/163 (65%), Gaps = 7/163 (4%)

Query: 1   MQRKSLDAWVGIFVLLGVAALVFLALKAGNMSSMSFGQKTYTIKASFDNIGGLKSRAAVK 60
           MQ K  + WVGIF+L  + A +F+ LKA N++S+   + TYT+ A+FDNIGGLK+R+ V 
Sbjct: 1   MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRT-EPTYTLYATFDNIGGLKARSPVS 59

Query: 61  SAGVVVGRVDSIRFDDQTFRAVVSLNMDESYK-FPKDSSAKILTSGLLGEQYIGIEPGGD 119
             GVVVGRV  I  D +T+   V+L +++ Y   P  SS  I TSGLLGEQY+ +  G +
Sbjct: 60  IGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119

Query: 120 -----TANLASGDTIKMTQSAIVLENLIGQFLYSKAAEGKDDS 157
                TA L  GDTI+ T+SA+VLE+LIGQFLY    +   +S
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNS 162