Pairwise Alignments

Query, 236 a.a., transcription regulator protein from Herbaspirillum seropedicae SmR1

Subject, 255 a.a., transcriptional regulator PdhR from Pseudomonas simiae WCS417

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 7/224 (3%)

Query: 11  QLQQVRISDQIADHIVRYIAEHKLEPGQSLPSEGELTRLFGVSRPTVREATNALAGRGLI 70
           Q++Q R+SD I + +   I E  L+ G+ LP+E  L   FGVSRP++REA   LA +GL+
Sbjct: 5   QVRQRRLSDDIVEQLEGMILEGTLKSGERLPAERALAEQFGVSRPSLREAIQKLAAKGLL 64

Query: 71  AVSSGKSPTVLPLSKVPFSNLAQHGLATQQITPIQILEVRHSLDLQAAVLAAEHRTPADI 130
               G    V       FS+     L         +LE R +L+   A  AA   T  D 
Sbjct: 65  VSRQGGGNYVAESLGSTFSDPLLLLLENNPEAQRDLLEFRQTLEASCAYYAALRATEVDR 124

Query: 131 DRLNAIVAQMPAALGNVEAFSPL-----DAAFHEAVGQATQNPLLSAIISGISPILFDS- 184
           +RL A    +       +  S +     DA FH A+ +A+ N +L   I G+  +L  + 
Sbjct: 125 ERLTAAFEALQDCYTRSDEVSRVEEGAADARFHLAIAEASHNAVLLHTIRGLFDLLKRNV 184

Query: 185 -TRSVHSHTRNQQEWDSVLLNHQNIAAAIINGNASAARRLVDIH 227
            T     + +  +  D ++  H+++  AII G A  AR +   H
Sbjct: 185 VTNIGGMYQQRTETRDMLISQHRDLYLAIIEGRAEQAREVSTRH 228