Pairwise Alignments

Query, 236 a.a., transcription regulator protein from Herbaspirillum seropedicae SmR1

Subject, 254 a.a., glycolate-inducible glc operon transcriptional repressor; autorepressor from Escherichia coli BL21

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 6/217 (2%)

Query: 17  ISDQIADHIVRYIAEHKLEPGQSLPSEGELTRLFGVSRPTVREATNALAGRGLIAVSSGK 76
           I + +A+ I R I +  L+ GQ LPSE  L    G SR  +RE    L GRG+I  + G+
Sbjct: 8   ICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFSRSALREGLTVLRGRGIIETAQGR 67

Query: 77  SPTVLPLSKVPFSNLAQHGLATQQITPIQILEVRHSLDLQAAVLAAEHRTPADIDRLNAI 136
              V  L++V  ++   H  +TQ  T   +L+VR  L+ ++A LAA   T AD   +   
Sbjct: 68  DSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRALLEGESARLAATLGTQADFVVITRC 127

Query: 137 VAQMPAALGNVEAFS-----PLDAAFHEAVGQATQNPLLSAIISGISPILFDST-RSVHS 190
             +M AA  N +  S      LD AFH A+ QA+ N +L   +  ++ ++F+S   SV++
Sbjct: 128 YEKMLAASENNKEISLIEHAQLDHAFHLAICQASHNQVLVFTLQSLTDLMFNSVFASVNN 187

Query: 191 HTRNQQEWDSVLLNHQNIAAAIINGNASAARRLVDIH 227
                Q+   +   H  I  A++      A+R    H
Sbjct: 188 LYHRPQQKKQIDRQHARIYNAVLQRLPHVAQRAARDH 224