Pairwise Alignments

Query, 1266 a.a., type VI secretion protein VasK from Herbaspirillum seropedicae SmR1

Subject, 1159 a.a., Uncharacterized protein conserved in bacteria from Enterobacter asburiae PDN3

 Score =  180 bits (456), Expect = 7e-49
 Identities = 156/676 (23%), Positives = 285/676 (42%), Gaps = 55/676 (8%)

Query: 595  DSSATNVEDAYNALKTYLMLSDKSRAEASHLNDQITRFWRGWLETNRGTMPREQMIRSAE 654
            D  A   +  Y+ LK +LM++   + + +     +         T  G         S +
Sbjct: 508  DQRAQLAKPGYDQLKAWLMMARPDKVDGAFYAQAMKTVQ----PTRMGISAGLWQSLSPD 563

Query: 655  RLISFSLEQIDDPSWPTTENKLTLVDQTRENLRHVVRGMPARERVYADVKARAATRFASM 714
                +  E    P W  T +   LV Q+R+ L   +    A   +Y ++       FA +
Sbjct: 564  LWAFYISELPKQPQWKITPDA-QLVSQSRQVLLQQIGRRNAESTLYENMLKSVRRNFADV 622

Query: 715  TVARIVGDKD-RELVMGSYAIPGTFTRNAWEKFVEDAFKEAANKELQSADWVLKTSSKED 773
            ++  +    D R L      + G FTR AWE  ++ A ++AAN      DWVL  S K  
Sbjct: 623  SLEDMTSGTDARRLFTTDEVVSGMFTRQAWEGGIQQAIEKAANSRRDEIDWVLSDSRKA- 681

Query: 774  LTLEGSPEQIQKALVSQYKSEYAREWQKFLQGVSIVELHNLDDATNAMNRLGDPLTSPIN 833
            ++ + SPE ++  L  +Y +++A  W  FL  +     +N+ D T+ +  + D   SP+ 
Sbjct: 682  VSADMSPEALKARLTERYFTDFAGSWLNFLNSLRWNPANNIADVTDQLTLMSDVRQSPLI 741

Query: 834  KVISTVYDETSWDNPSLIGSGLATASRGLSGWFKETVLRRSPAPPPAPPQLNTDGGAAIP 893
             +++T+    +W   +         S GLS    +++++ +        +   D  A  P
Sbjct: 742  ALMNTL----AWQGQT------GQQSEGLS----DSIIKSAKDLVGGKDKPAIDQSATGP 787

Query: 894  MGPVAREFAGVARLVVSKDKGNSLMRG--------YMENLSKLRTRLNTIKNQGDTGPGA 945
             GP+   F  + +L+  K+ G+++M          Y+  ++++R RL  + +  D     
Sbjct: 788  QGPLDETFGPLLQLL-GKNTGSNVMSADNSLSLQTYLTRITRVRLRLQQVASASDPQEMM 846

Query: 946  KQLMQQTLDGSGSELSDALKFVDEEMLPGLNDQQKTTLRPLLVRPLVQGFNALVHPTEGE 1005
            + L Q    G   +L+D  ++    +   L ++       + V+PL Q +  ++ P+   
Sbjct: 847  QTLAQTVFQGKSVDLTDTQQY-GSLISASLGEEWSGFGSTMFVQPLTQAWETVLQPSAAS 905

Query: 1006 LNKIWRAQVYEPFQNNLATKYPFSPSSKIEANSGEINTVFGESGAISKFVTTAMGPLVVR 1065
            LN  W   V   ++     ++PF+ S    +       +  +SG I +F+TT +  ++ +
Sbjct: 906  LNDKWTRSVVANWRTAFEGRFPFAASKSDASLPMLAEFIRKDSGRIDRFLTTELSGVLHK 965

Query: 1066 RGDTLSPRKWADMGITLSPAIT------TSFADWISTHGSTGAGGGAGDAQTVFQIQPQP 1119
             G    P K    G++ +PA        +  +D + T GS G           F++Q +P
Sbjct: 966  EGSQWVPDKVNSQGLSFNPAFLRAINQLSELSDILFTDGSQGIS---------FELQARP 1016

Query: 1120 APGALEYTIEIDGQQLRYRNTQAQWVNFVWPNPQGSPGARVTAVTYDGRTVEVASQPGRF 1179
            A   +E  + IDGQ+L Y N  A W +F WP     PG  +T  + +          G +
Sbjct: 1017 ASQIVETQLTIDGQKLHYFNQMADWQSFRWPGDTYKPGTMLTWTSVNAGARLFGDYRGTW 1076

Query: 1180 GLERLINTAQRKRKDNGAFELSWT-NEGVTVMVSLKIISSAEVSGNGSGTARGTAGLRGL 1238
            G  R ++  +R++ D   + +++T  +G T+   L+       S  G G       LRG 
Sbjct: 1077 GFIRWLDQGKRQQLDRSQWMVTYTAPDGRTLQWVLR-------SQLGRGPL-ALLELRGF 1128

Query: 1239 KLPETIAGGGSALQAQ 1254
             LP+ I    SA  AQ
Sbjct: 1129 TLPDQIFSVDSAATAQ 1144